Gene Dde_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2857 
Symbol 
ID3758818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2845105 
End bp2847129 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content57% 
IMG OID637783758 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_389347 
Protein GI78357898 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000256668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCATT TCATCCGTAA ATCCATAGGA CTGAAGACGC TTACACTTAT TGCCGGCATA 
TCCGTTGTCG TGTTCACCAT ACTTATAGGT GTGACCACCC AGCGTCAGTA TGACGGCATG
CTGGGGCAGA TGGACACCGC ACTCACGCGG GTTTCTGAGC TTATCAAACT GGCAACTGAC
GGTCCCATGC TGGTGGGCGA TGATGACGGT ACAAAGGCTC AGTTCGCTCT GCTGGCAAAA
CGGTATCCCG ATACGCAGGT GTATATAACA AATTTTAAAA ACAATATTAC CTACAGCACG
CGTACGGGCA CAGTCCGCAA GGATGTGGAA GATGTTTTTT CCGACCCTTC GGTGCTGGCG
CTTACCGAAA AGGCAGTGAA AACAGACGTG CACGAGGGAT TGCTGCTCAA GGAGGGCGGA
AAATCCTTCA TGCTCCGCAG TACCAGCATT CCCAACGACG ATTCGTGCCA CCACTGTCAT
GGTTCGTCTC AGCCCATTCT GGGGCAGCTT GTGGTGGTCA AGGATGTCAC CCCCATGGTC
GCGGGTATCC ATCGTCAGGT GCTTGAGACG GTGGCGTTTT CTGTGGGCGG ACTGGCAACG
CTAATCTGCA TCGTGTTCTT TTTTCTGCGC AAGACAGTTA TCAAGCCCGT ACAGGAGATC
ACCGAGGCCA GCCACAGAAT CGCCCACGGC GAGCTGGAGA CGCAGTTCAC TGTCCATTCG
CAGGACGAAC TGGGCAAGCT GGAGAGCAAT CTCGGCGAGA TGGTGGGCAA GCTCAAGGAG
CAGCTGGGCT TTTCGCGCGG GATACTGCAG GGCATGACCA CGCCGTTTCT GGTTACGGAT
ACGGAAGGCA ATGTGACTTT CACCAATAAA GGCATGGTGG ACTGTCTGTG CGAACTGGGT
GATCCTGACC AGCATGTGGG CAAAACCGTT GGAGAGTTTT TCTATAACGA CGTGAGCCGC
GAAACGCTTA CCCACAAGGT GCTTGCCAAC CGCAAGGCCA TTACCGGCGT GGAGGTGGAA
TTTACCGACC GCGACGGTGA AACCCGCTAC AGTGTGCTTG ACAGCTCGCC CATATATGAT
CTGGACGGCA ACCTGATGGG AGCCTTTACC GTTTGTACTG ACATGACGGA ATTCCGCCGC
CAGCAGCGTC TGGTGGAAGA GCAGAATTCG CGCATCACCC GCGCGGCGGA AGCTGCGGGA
GCCATCGCCG TACAGGTGTC TTCAGCTTCC GAGGAGCTTT CGGCGCAGGT GGAGCAGTCC
AGTTCCGGCG CGGAAGAGCA GCGCAGCCTT ACTGCCGAAG GGGCCACAGC CATGGAGCAG
ATGAACGCCA CTGTCACCGA GGTGGCGCGG AATGCTTCCA ATGCGGCCGA AATGGCGGGA
AAAGCACAGG ACGTGGCCAA GAACGGGGTT TCCGTGGTGG AAGATACCGT GCGCCACATC
AACGATGTTG CACGACAGGC TGAAAGTCTG AAAACGGAAA TGGGCGGACT GGCGGACAAG
GCGGAAGGCA TAGGCGAGAT TATCAACGTG ATTGAAGATA TTGCCGACCA GACCAACCTG
CTGGCCCTCA ACGCCGCCAT AGAGGCTGCG CGCGCGGGCG ATGCCGGACG CGGGTTTGCC
GTGGTGGCCG ATGAAGTGCG CAAGCTGGCG GAAAAAACCA TGAGTGCCAC CCGTCAGGTC
GTGGATTATG TGGGGTCCAT TCAGGAAAGC ACCCGCAGAA ATATGGCTGC CACGGAAGAG
GCGGTGAAGC TGGTGGAGCA GTCCACGGCC ATGGCCGGAG AATCGGGCCG TACCCTGCAT
TCCATCGTCC AGATGGTGGT GGAGACGGCG GATCAGGTGC GTGCCATTGC CACCGCCGCC
GAAGAACAGT CTGCCGCCAG CGAGCAGATA AACCGCTCCA TGGAGCAGAT AAGCCGCATT
TCTTCGGAAA CGGCCGATGC CATGAACCAG TCGGCACAGG CGGTTTCAGA CCTTGCGCGG
CTGGCTGTGG ATCTTAACGC CATTATTACC GACATGCGGC GCTGA
 
Protein sequence
MLHFIRKSIG LKTLTLIAGI SVVVFTILIG VTTQRQYDGM LGQMDTALTR VSELIKLATD 
GPMLVGDDDG TKAQFALLAK RYPDTQVYIT NFKNNITYST RTGTVRKDVE DVFSDPSVLA
LTEKAVKTDV HEGLLLKEGG KSFMLRSTSI PNDDSCHHCH GSSQPILGQL VVVKDVTPMV
AGIHRQVLET VAFSVGGLAT LICIVFFFLR KTVIKPVQEI TEASHRIAHG ELETQFTVHS
QDELGKLESN LGEMVGKLKE QLGFSRGILQ GMTTPFLVTD TEGNVTFTNK GMVDCLCELG
DPDQHVGKTV GEFFYNDVSR ETLTHKVLAN RKAITGVEVE FTDRDGETRY SVLDSSPIYD
LDGNLMGAFT VCTDMTEFRR QQRLVEEQNS RITRAAEAAG AIAVQVSSAS EELSAQVEQS
SSGAEEQRSL TAEGATAMEQ MNATVTEVAR NASNAAEMAG KAQDVAKNGV SVVEDTVRHI
NDVARQAESL KTEMGGLADK AEGIGEIINV IEDIADQTNL LALNAAIEAA RAGDAGRGFA
VVADEVRKLA EKTMSATRQV VDYVGSIQES TRRNMAATEE AVKLVEQSTA MAGESGRTLH
SIVQMVVETA DQVRAIATAA EEQSAASEQI NRSMEQISRI SSETADAMNQ SAQAVSDLAR
LAVDLNAIIT DMRR