Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2857 |
Symbol | |
ID | 3758818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2845105 |
End bp | 2847129 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783758 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_389347 |
Protein GI | 78357898 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000256668 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCATT TCATCCGTAA ATCCATAGGA CTGAAGACGC TTACACTTAT TGCCGGCATA TCCGTTGTCG TGTTCACCAT ACTTATAGGT GTGACCACCC AGCGTCAGTA TGACGGCATG CTGGGGCAGA TGGACACCGC ACTCACGCGG GTTTCTGAGC TTATCAAACT GGCAACTGAC GGTCCCATGC TGGTGGGCGA TGATGACGGT ACAAAGGCTC AGTTCGCTCT GCTGGCAAAA CGGTATCCCG ATACGCAGGT GTATATAACA AATTTTAAAA ACAATATTAC CTACAGCACG CGTACGGGCA CAGTCCGCAA GGATGTGGAA GATGTTTTTT CCGACCCTTC GGTGCTGGCG CTTACCGAAA AGGCAGTGAA AACAGACGTG CACGAGGGAT TGCTGCTCAA GGAGGGCGGA AAATCCTTCA TGCTCCGCAG TACCAGCATT CCCAACGACG ATTCGTGCCA CCACTGTCAT GGTTCGTCTC AGCCCATTCT GGGGCAGCTT GTGGTGGTCA AGGATGTCAC CCCCATGGTC GCGGGTATCC ATCGTCAGGT GCTTGAGACG GTGGCGTTTT CTGTGGGCGG ACTGGCAACG CTAATCTGCA TCGTGTTCTT TTTTCTGCGC AAGACAGTTA TCAAGCCCGT ACAGGAGATC ACCGAGGCCA GCCACAGAAT CGCCCACGGC GAGCTGGAGA CGCAGTTCAC TGTCCATTCG CAGGACGAAC TGGGCAAGCT GGAGAGCAAT CTCGGCGAGA TGGTGGGCAA GCTCAAGGAG CAGCTGGGCT TTTCGCGCGG GATACTGCAG GGCATGACCA CGCCGTTTCT GGTTACGGAT ACGGAAGGCA ATGTGACTTT CACCAATAAA GGCATGGTGG ACTGTCTGTG CGAACTGGGT GATCCTGACC AGCATGTGGG CAAAACCGTT GGAGAGTTTT TCTATAACGA CGTGAGCCGC GAAACGCTTA CCCACAAGGT GCTTGCCAAC CGCAAGGCCA TTACCGGCGT GGAGGTGGAA TTTACCGACC GCGACGGTGA AACCCGCTAC AGTGTGCTTG ACAGCTCGCC CATATATGAT CTGGACGGCA ACCTGATGGG AGCCTTTACC GTTTGTACTG ACATGACGGA ATTCCGCCGC CAGCAGCGTC TGGTGGAAGA GCAGAATTCG CGCATCACCC GCGCGGCGGA AGCTGCGGGA GCCATCGCCG TACAGGTGTC TTCAGCTTCC GAGGAGCTTT CGGCGCAGGT GGAGCAGTCC AGTTCCGGCG CGGAAGAGCA GCGCAGCCTT ACTGCCGAAG GGGCCACAGC CATGGAGCAG ATGAACGCCA CTGTCACCGA GGTGGCGCGG AATGCTTCCA ATGCGGCCGA AATGGCGGGA AAAGCACAGG ACGTGGCCAA GAACGGGGTT TCCGTGGTGG AAGATACCGT GCGCCACATC AACGATGTTG CACGACAGGC TGAAAGTCTG AAAACGGAAA TGGGCGGACT GGCGGACAAG GCGGAAGGCA TAGGCGAGAT TATCAACGTG ATTGAAGATA TTGCCGACCA GACCAACCTG CTGGCCCTCA ACGCCGCCAT AGAGGCTGCG CGCGCGGGCG ATGCCGGACG CGGGTTTGCC GTGGTGGCCG ATGAAGTGCG CAAGCTGGCG GAAAAAACCA TGAGTGCCAC CCGTCAGGTC GTGGATTATG TGGGGTCCAT TCAGGAAAGC ACCCGCAGAA ATATGGCTGC CACGGAAGAG GCGGTGAAGC TGGTGGAGCA GTCCACGGCC ATGGCCGGAG AATCGGGCCG TACCCTGCAT TCCATCGTCC AGATGGTGGT GGAGACGGCG GATCAGGTGC GTGCCATTGC CACCGCCGCC GAAGAACAGT CTGCCGCCAG CGAGCAGATA AACCGCTCCA TGGAGCAGAT AAGCCGCATT TCTTCGGAAA CGGCCGATGC CATGAACCAG TCGGCACAGG CGGTTTCAGA CCTTGCGCGG CTGGCTGTGG ATCTTAACGC CATTATTACC GACATGCGGC GCTGA
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Protein sequence | MLHFIRKSIG LKTLTLIAGI SVVVFTILIG VTTQRQYDGM LGQMDTALTR VSELIKLATD GPMLVGDDDG TKAQFALLAK RYPDTQVYIT NFKNNITYST RTGTVRKDVE DVFSDPSVLA LTEKAVKTDV HEGLLLKEGG KSFMLRSTSI PNDDSCHHCH GSSQPILGQL VVVKDVTPMV AGIHRQVLET VAFSVGGLAT LICIVFFFLR KTVIKPVQEI TEASHRIAHG ELETQFTVHS QDELGKLESN LGEMVGKLKE QLGFSRGILQ GMTTPFLVTD TEGNVTFTNK GMVDCLCELG DPDQHVGKTV GEFFYNDVSR ETLTHKVLAN RKAITGVEVE FTDRDGETRY SVLDSSPIYD LDGNLMGAFT VCTDMTEFRR QQRLVEEQNS RITRAAEAAG AIAVQVSSAS EELSAQVEQS SSGAEEQRSL TAEGATAMEQ MNATVTEVAR NASNAAEMAG KAQDVAKNGV SVVEDTVRHI NDVARQAESL KTEMGGLADK AEGIGEIINV IEDIADQTNL LALNAAIEAA RAGDAGRGFA VVADEVRKLA EKTMSATRQV VDYVGSIQES TRRNMAATEE AVKLVEQSTA MAGESGRTLH SIVQMVVETA DQVRAIATAA EEQSAASEQI NRSMEQISRI SSETADAMNQ SAQAVSDLAR LAVDLNAIIT DMRR
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