Gene Dde_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2826 
Symbol 
ID3757849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2811936 
End bp2813573 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content63% 
IMG OID637783727 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_389316 
Protein GI78357867 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAACA ACGGATATCT GACGCACTGC GGGCGGCCTG ATACTGAACG GGAACGTCCC 
GGCGTGCTGC TGGACACCTC GCCCGTGGGG GCTTTTCTGG TGTCGTGCGA CGGAGCACTG
CTGGAGTGCA ACCGGACCTT TGCATCACAG GCCGGGCTGG GTGCCCGGCA GGCTGCAGGA
CACACGCTGC GCTCTCTGCT GGGCGATGCC GACTGGCCGG TGCACGCAGC CGCGCTTAAA
CGGTGTGCCG AACATGCCGA GCCCGTGCGT TATGAAGTGC TGCTGCCGCA GGGCTGGAGG
GCGTTCGCCC TGTATCCTGT GGCTGCCGCG CTGGGACGCG TGGCCTGTGT GGCCGGATAT
GCGCTTGATC TGTCAGGTCC GTCTGGGCGC CGTCCGTCCG GCTTTGCACC GGATTCCGCC
TTGCATCCCG AGGAGTGTGC AGGGAGCGGT CAGGATGATG GACAGCCCCC TGAACCGGCT
CATGAACTGG CGGCTGCTCC GGCCGGTGTT TTGTCCGGCG GCGCAGTGCG CCGGGCTGAT
GCTGCCGGAC AGCCGGTACA TGCGGTGCAG AACTCCGGCG GTGCTGCGGT GGGGTATATT
TCGCCCTCGG GGCGGCTGCT GCAGCTCAGC GCTGCCCTGT GCACCATGCT GGGCGGCTCG
CACGACCAGT TACGCGGCAG CGATTTTGCG CTGTCGTTTA ATGAGAATGA CCGCCCCGCA
GTGCGCGAGC GTCTGCGGGC CGGGGTGGGT TCCGGCGTGG AAGGAGTGGC TTTCGAGGCG
CGTCTGAACG CTCTGCAGGA TGAGGACAAA TGGTGCCGGG TGCATTGTCT TGGCGTATGT
GCCGCAGAAG ACAAACCCCT GTTCGGCATC GTGGTGGCGG AGGATGTTTC GCACATCCGC
AGACTGCGGG CCGAAGCAGT GCGTGCCGGA CAGCTTGCTT CGCTGGGCGA ACTGGCGGCG
GGTGTTGCTC ACGAAATCAA TAACCCCGTG AACGGCATCA TCAATTACGC CCAGCTGCTG
CTTGATGCAG CGGAATCGCG CAAGGCACAG GCCGAAGCGG GGATAGCCAG AAAAATTATC
AAGGAAGGCA GCAGAATAGC AGATATCGCT CATAATCTGC TGTTTTTTGC CCGGGACAGG
CGTCAGGAGA TGGCCCTGCT GCGTCCCGAA GCCGTGCTGC TTGAGTCGCT GGACCTTACC
CGTGCCATGA TCAGCCGTGA CGGCATAACC CTGCAGATTG CCGTAGAGCC TGATCTGCCC
ATGGTGCGGG GACGCAGCCG TGAATTGCAG CAGGTTTTTC TGAATGTCAT CAGCAATGCG
CGTTATGCAC TTAACAGACG TTTTGCAACG CCGTGTCCGG AAAAGCACCT TGCCATATCG
CTGCGCAGCC GCCGCGGGGG CGAAGGCATG GTGGTGGCGG AATTTGTCGA TCAGGGCGGA
GGAATTCCCG GGCATCTGCG TGCCAGAGTG CTGGAACCTT TTTTTTCCAC CAAGCCGGAG
CGTGAAGGCA CCGGGCTTGG GCTGTCCATC AGCCAGAGTA TTATCAGAGC ACATGGCGGC
CTGCTGGAAC TGTACAGCGA CGGGCACACG TATACGCGGG TGCAGATCAG CCTGCCCACC
CCCACAGGAG CGCAATAA
 
Protein sequence
MDNNGYLTHC GRPDTERERP GVLLDTSPVG AFLVSCDGAL LECNRTFASQ AGLGARQAAG 
HTLRSLLGDA DWPVHAAALK RCAEHAEPVR YEVLLPQGWR AFALYPVAAA LGRVACVAGY
ALDLSGPSGR RPSGFAPDSA LHPEECAGSG QDDGQPPEPA HELAAAPAGV LSGGAVRRAD
AAGQPVHAVQ NSGGAAVGYI SPSGRLLQLS AALCTMLGGS HDQLRGSDFA LSFNENDRPA
VRERLRAGVG SGVEGVAFEA RLNALQDEDK WCRVHCLGVC AAEDKPLFGI VVAEDVSHIR
RLRAEAVRAG QLASLGELAA GVAHEINNPV NGIINYAQLL LDAAESRKAQ AEAGIARKII
KEGSRIADIA HNLLFFARDR RQEMALLRPE AVLLESLDLT RAMISRDGIT LQIAVEPDLP
MVRGRSRELQ QVFLNVISNA RYALNRRFAT PCPEKHLAIS LRSRRGGEGM VVAEFVDQGG
GIPGHLRARV LEPFFSTKPE REGTGLGLSI SQSIIRAHGG LLELYSDGHT YTRVQISLPT
PTGAQ