Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2826 |
Symbol | |
ID | 3757849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2811936 |
End bp | 2813573 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637783727 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_389316 |
Protein GI | 78357867 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACAACA ACGGATATCT GACGCACTGC GGGCGGCCTG ATACTGAACG GGAACGTCCC GGCGTGCTGC TGGACACCTC GCCCGTGGGG GCTTTTCTGG TGTCGTGCGA CGGAGCACTG CTGGAGTGCA ACCGGACCTT TGCATCACAG GCCGGGCTGG GTGCCCGGCA GGCTGCAGGA CACACGCTGC GCTCTCTGCT GGGCGATGCC GACTGGCCGG TGCACGCAGC CGCGCTTAAA CGGTGTGCCG AACATGCCGA GCCCGTGCGT TATGAAGTGC TGCTGCCGCA GGGCTGGAGG GCGTTCGCCC TGTATCCTGT GGCTGCCGCG CTGGGACGCG TGGCCTGTGT GGCCGGATAT GCGCTTGATC TGTCAGGTCC GTCTGGGCGC CGTCCGTCCG GCTTTGCACC GGATTCCGCC TTGCATCCCG AGGAGTGTGC AGGGAGCGGT CAGGATGATG GACAGCCCCC TGAACCGGCT CATGAACTGG CGGCTGCTCC GGCCGGTGTT TTGTCCGGCG GCGCAGTGCG CCGGGCTGAT GCTGCCGGAC AGCCGGTACA TGCGGTGCAG AACTCCGGCG GTGCTGCGGT GGGGTATATT TCGCCCTCGG GGCGGCTGCT GCAGCTCAGC GCTGCCCTGT GCACCATGCT GGGCGGCTCG CACGACCAGT TACGCGGCAG CGATTTTGCG CTGTCGTTTA ATGAGAATGA CCGCCCCGCA GTGCGCGAGC GTCTGCGGGC CGGGGTGGGT TCCGGCGTGG AAGGAGTGGC TTTCGAGGCG CGTCTGAACG CTCTGCAGGA TGAGGACAAA TGGTGCCGGG TGCATTGTCT TGGCGTATGT GCCGCAGAAG ACAAACCCCT GTTCGGCATC GTGGTGGCGG AGGATGTTTC GCACATCCGC AGACTGCGGG CCGAAGCAGT GCGTGCCGGA CAGCTTGCTT CGCTGGGCGA ACTGGCGGCG GGTGTTGCTC ACGAAATCAA TAACCCCGTG AACGGCATCA TCAATTACGC CCAGCTGCTG CTTGATGCAG CGGAATCGCG CAAGGCACAG GCCGAAGCGG GGATAGCCAG AAAAATTATC AAGGAAGGCA GCAGAATAGC AGATATCGCT CATAATCTGC TGTTTTTTGC CCGGGACAGG CGTCAGGAGA TGGCCCTGCT GCGTCCCGAA GCCGTGCTGC TTGAGTCGCT GGACCTTACC CGTGCCATGA TCAGCCGTGA CGGCATAACC CTGCAGATTG CCGTAGAGCC TGATCTGCCC ATGGTGCGGG GACGCAGCCG TGAATTGCAG CAGGTTTTTC TGAATGTCAT CAGCAATGCG CGTTATGCAC TTAACAGACG TTTTGCAACG CCGTGTCCGG AAAAGCACCT TGCCATATCG CTGCGCAGCC GCCGCGGGGG CGAAGGCATG GTGGTGGCGG AATTTGTCGA TCAGGGCGGA GGAATTCCCG GGCATCTGCG TGCCAGAGTG CTGGAACCTT TTTTTTCCAC CAAGCCGGAG CGTGAAGGCA CCGGGCTTGG GCTGTCCATC AGCCAGAGTA TTATCAGAGC ACATGGCGGC CTGCTGGAAC TGTACAGCGA CGGGCACACG TATACGCGGG TGCAGATCAG CCTGCCCACC CCCACAGGAG CGCAATAA
|
Protein sequence | MDNNGYLTHC GRPDTERERP GVLLDTSPVG AFLVSCDGAL LECNRTFASQ AGLGARQAAG HTLRSLLGDA DWPVHAAALK RCAEHAEPVR YEVLLPQGWR AFALYPVAAA LGRVACVAGY ALDLSGPSGR RPSGFAPDSA LHPEECAGSG QDDGQPPEPA HELAAAPAGV LSGGAVRRAD AAGQPVHAVQ NSGGAAVGYI SPSGRLLQLS AALCTMLGGS HDQLRGSDFA LSFNENDRPA VRERLRAGVG SGVEGVAFEA RLNALQDEDK WCRVHCLGVC AAEDKPLFGI VVAEDVSHIR RLRAEAVRAG QLASLGELAA GVAHEINNPV NGIINYAQLL LDAAESRKAQ AEAGIARKII KEGSRIADIA HNLLFFARDR RQEMALLRPE AVLLESLDLT RAMISRDGIT LQIAVEPDLP MVRGRSRELQ QVFLNVISNA RYALNRRFAT PCPEKHLAIS LRSRRGGEGM VVAEFVDQGG GIPGHLRARV LEPFFSTKPE REGTGLGLSI SQSIIRAHGG LLELYSDGHT YTRVQISLPT PTGAQ
|
| |