Gene Dde_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2807 
Symbol 
ID3757830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2795600 
End bp2796136 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID637783708 
Productnuclease (SNase-like) 
Protein accessionYP_389297 
Protein GI78357848 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00150481 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG TGACGACGAT GCCCATTACC AAACACAAGG CTTTGCCCCT AATCGCCTAT 
CTGCTTTTCT TTTTCCTTTC CTGCTCCCTC ATATCCCCGT CGCTTATCGT TACCGCTCAA 
GCACGCGAGG ATGATGACGG CGCAACTCCT ACCCCGTCTT ACACTTCAAC GAACGTCGTT 
ATTGTCTCCC GCGTGACCAG CGTCTATGAC GGCGACACTT TTAGATGCGA TATAGATGGC 
TGGCCTGCTA TAATTGGCAA GAACATTGGC ATTAGAATCA ACGGCATTGA TACGCCTGAG 
ATGCGCGACA AACGCCCACA GGTGAAGGCA CTAGCTATTG AAGCAAGGGA CTTTGTACGT 
TCAAGGCTCA AGGAAGCAAA CGTCATTGAA CTTCGTAATA TCCAGCGAGG GAAGTATTTC 
CGTATCGTCG CAGACGTGTA CCTTGATGGT AGTGTGAACT TGGCTGAGGA ACTGATTCAG 
CGAGGGCTTG CTTGTGAATA TCACGGTGGG AAGAAAGTCT TTGACTGGGA AAAATGA
 
Protein sequence
MNKVTTMPIT KHKALPLIAY LLFFFLSCSL ISPSLIVTAQ AREDDDGATP TPSYTSTNVV 
IVSRVTSVYD GDTFRCDIDG WPAIIGKNIG IRINGIDTPE MRDKRPQVKA LAIEARDFVR 
SRLKEANVIE LRNIQRGKYF RIVADVYLDG SVNLAEELIQ RGLACEYHGG KKVFDWEK