| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2787 |
|---|
| Symbol | |
|---|
| ID | 3757810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2783756 |
|---|
| End bp | 2784535 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637783689 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_389278 |
|---|
| Protein GI | 78357829 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.369354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCA TGATATTAAT TACCGTTTGC TCTTTCATTC TAAGCTTCAT TTTCGCTTTA
GGGGGAGTTG GTTCGGCCCT TGTCCTTATC CCAACATTGA CTTGGTTTGG GGTACCCTTT
TCCCTGGCAC GTCCAACTGG CCTTTTTGTG AACACAGTAA GCATGACCGG TGCAACATTT
TCAAACATTA AAGAAAAACG CCTTGATTTC AAACTCGGCA TTCCCATCAT TATATCTTCT
ACCATCATGG CACCAGCTGG AGCGTATATT GGACATATCA TGCCAACCAA ATGGGTGATG
CTTTGCTTTA TCAGCTTTTT AACGTTCTCC GGATTTATGA TGCTCTTTTT TAAAAAATCA
AAATATGCTT CGCAATATAG GGAGGACCGC CCTGTTGCAT GGCCAACTTT TGTCGGAATC
ATTGCAGGTT TCATGTCAGG CTTACTAGGA GTAGGTGGCG GAGGTTTAAT ATCTCCACTC
ATGATATTAA AGGGCTTCAA CCCAAAAAAA GTCGCGACGG TAACAGCCTT CTCCGTCCCA
TTTTCATCAT TTTCCGCATT TGTCACCTAT GCTGCTATGG GATCAGTATC GTTCAAAATT
TTAATTTTTG CGGGGATTGC CGCTTGGACA GGTGGGTATA TGGGAACCAA AGTGATGCAC
TTAAAATTGC AGCCAGAAAC GGTCAAACGC GTCCTAGCTT GCGTTTTGCT GATAATGGCA
GGAAAGTTAT TGCTGAGTTT CATGTTCTCA GGCACCGATT TTTTATTGCC TCATGCATGA
|
|---|
| Protein sequence | MTSMILITVC SFILSFIFAL GGVGSALVLI PTLTWFGVPF SLARPTGLFV NTVSMTGATF
SNIKEKRLDF KLGIPIIISS TIMAPAGAYI GHIMPTKWVM LCFISFLTFS GFMMLFFKKS
KYASQYREDR PVAWPTFVGI IAGFMSGLLG VGGGGLISPL MILKGFNPKK VATVTAFSVP
FSSFSAFVTY AAMGSVSFKI LIFAGIAAWT GGYMGTKVMH LKLQPETVKR VLACVLLIMA
GKLLLSFMFS GTDFLLPHA
|
|---|
| |