Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2725 |
Symbol | |
ID | 3757748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2726144 |
End bp | 2728339 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783627 |
Product | helicase RecD/TraA |
Protein accession | YP_389216 |
Protein GI | 78357767 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.115291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGATC CCGCCCCGCA GGAAGAGATG GACGCACAGG TCGAGCTGGT AGGCACACTG GAGCGTGTGG TTTTTCACAA TGAGGAAAAC GGATACACGG TGTTCCGGCT TAAGGTGCAG GGCAACCGCG ATCAGGTGAC GGTGGTGGGC CACATGGTGG AGCCGCAGGC CGGTGTGGCG TTGTCGCTCA AGGGGGACTG GACGGAAAAT CCCCGTTTCG GCCGTCAGTT TCAGATGTCC AGCTTTGATC AGGTGCTGCC TGCCACGCTG GAAGGCATCC GGCATTATCT TTCTTCGGGC CTTATCAAAG GCGTGGGGGA AAAGATGGCG GGCCGCATCG TTGAAACCTT CGGCACCGGG ACATTCAACG TGCTGGATGA CGAACCGGAG CGCATGCTGG AGGTGGAGGG CGTCGGGCAG AAGCTTATGG AGCGCATCCG CGACGGATGG GCCGAGCACA GGGGTATCCG CGACCTCATC ATGTTTTTGC AGCCCCACGG GGTAAGCACC TCGTACGCGG TGCGCATATA CCGGCATTAC GGTCAGCAGG CTCTGGCCGT GGTGCGCGAA AACCCCTACC GGCTGGCCAT GGACATACGC GGCATAGGTT TTCTGACCGC AGATGCCGTG GCGCAGAAAC TGGGTTTTGC CCGCGACTGC GACCTGCGTG CGGAGGCCGG TCTGCTCTAC ATGCTCATGC GTCTGACTGA GGACGGCCAT GTGTACTACC CCCGCGACGA ACTGGTCATA CAGACTTCGG ACAAGCTGGA AATTTCCGCG CCCATGGTCG ATCAGGCCAT AGACAACCTG CAGCTGGAAG AGCGCATCGT TCTGGATGAG ACGGACAGCG GTCAGGCTGT GTATCTTTCG CGGTATCACC GGTACGAATC TGGCATATCG CATTATCTGC GCCGTATTCT GCATTCACCC AAATCCGTGT CCGGCGGCGA CGAGGATGCG CTGGTGGACG AGATAGTCGC AGGACTGGAC ATCACGCTGG CCGAAGAGCA GGAGCAGGCC GTGCGCACCG CGGCCCGCAG CAAAGTAATG GTGCTTACCG GCGGTCCGGG TACAGGCAAG ACCACAATCA TCAACGCCAT TATCAAAGTG TTCGCGGCCA TGAAGGCGCG CATTCTGCTG GCTGCTCCCA CGGGAAGAGC GGCCAAACGC ATGAGCGAAA CCAGCGGGCG CGAGTCCAAG ACCATTCACC GGCTTCTGGA ATACAGCCCG CGCGAGGACG GTTTTTCGCG CAACGAGAAC AATCCGCTGG CCTGCAGCCT GCTGGTGGTG GATGAAGCCT CGATGATGGA CACCATGCTC ATGTACCATC TGCTTAAAGC GGTGCCGCTG GGGGCCACTG TGGTTTTTGT GGGTGATGTG AATCAGCTGC CTTCCGTCGG GCCGGGCAAC GTGCTGCAGG ATGTCATCCG GTCGGGCGTG GTGGACGTGG TGGAACTGGT GGAAGTGTTC CGGCAGGCGC AGGAAAGTGA AATAATCTGC AACGCACACC TTATCAATCA GGGCGAGATT CCGTCGCTGG AATCTTCCAA AGACCGGTTG AGCGATTTTT ATTTCATCAG GCAGGAAGAC CCGGACCGCG TGGCCGATAT GGTTGTCGAT CTGGTGAAAA ATCATATTCC CCGCAGATTC CGGCTGGACT CCATAAATGA TATTCAGGTG CTGACGCCCA TGCACAAGGG AACAGCCGGC GCCGCCAACC TGAATACGCG GCTGCAGGAG GCTCTTAACC CCAAAACGCT GGTCATTCAG CGCGGCGAGC GGCAGTTCCG GCTGGACGAC AAAGTGATGC AGATACGCAA TAACTACGAA AAAGATGTCT TTAACGGAGA CATAGGGCGC ATCTGCAGGC TTGATAAGGA AGAGCGCGAG CTGACTGTCC GGTTCGACGA AGAACGTAAT GTAGTGTACG AATTTTCAGA GCTGGATGAA CTGGTTCCTG CCTATGCCAT ATCAGTGCAC AAGTCGCAGG GGTCGGAATA TCCCGCCGTG GTCATGCCTG TGCTGACACA GCACTATGTG CTGCTGCAGC GCAACCTGCT GTATACCGGT GTCACCCGCG GCAAGCGGCT GGTGGTGCTG GTGGGTTCGC AGCGCGCGCT GGCCATTGCC GTCAAAAATA ATAAGATGCA GAAACGCTTT ACGTATCTGG CGCAGCGCCT GGCCCGCGGG GTATGA
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Protein sequence | MQDPAPQEEM DAQVELVGTL ERVVFHNEEN GYTVFRLKVQ GNRDQVTVVG HMVEPQAGVA LSLKGDWTEN PRFGRQFQMS SFDQVLPATL EGIRHYLSSG LIKGVGEKMA GRIVETFGTG TFNVLDDEPE RMLEVEGVGQ KLMERIRDGW AEHRGIRDLI MFLQPHGVST SYAVRIYRHY GQQALAVVRE NPYRLAMDIR GIGFLTADAV AQKLGFARDC DLRAEAGLLY MLMRLTEDGH VYYPRDELVI QTSDKLEISA PMVDQAIDNL QLEERIVLDE TDSGQAVYLS RYHRYESGIS HYLRRILHSP KSVSGGDEDA LVDEIVAGLD ITLAEEQEQA VRTAARSKVM VLTGGPGTGK TTIINAIIKV FAAMKARILL AAPTGRAAKR MSETSGRESK TIHRLLEYSP REDGFSRNEN NPLACSLLVV DEASMMDTML MYHLLKAVPL GATVVFVGDV NQLPSVGPGN VLQDVIRSGV VDVVELVEVF RQAQESEIIC NAHLINQGEI PSLESSKDRL SDFYFIRQED PDRVADMVVD LVKNHIPRRF RLDSINDIQV LTPMHKGTAG AANLNTRLQE ALNPKTLVIQ RGERQFRLDD KVMQIRNNYE KDVFNGDIGR ICRLDKEERE LTVRFDEERN VVYEFSELDE LVPAYAISVH KSQGSEYPAV VMPVLTQHYV LLQRNLLYTG VTRGKRLVVL VGSQRALAIA VKNNKMQKRF TYLAQRLARG V
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