Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2664 |
Symbol | |
ID | 3757687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2676732 |
End bp | 2678036 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637783566 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_389155 |
Protein GI | 78357706 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.287942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAACG TTCGTTCCGC CGTGACAGAT GAACTGGATT TTTACGGGCT TTCCACACCC ATGGAGCTGG TGGAAACCTA TGGCAGCCCG CTGTACGTGT ATAATGAAAA CGTACTGCGC CGCAGATGCC GCGAATTGAA AGGGTTGAGC AGTCATCCGG GGTTCCGGGT CAATTATTCG GCCAAGGCCA ATGCCAATCT TTCGCTGCTG CGCATTATCC GTTCCGAAGG ACTGGTGGTG GATGCCATGT CTCCCGGCGA AATCGCCATG CATCTTGCGG CGGGATTCAC GCCCGACGAA ATAACCTACG TCTGCAACAA CGTTTCTGCC GAAGAACTGC GCAATGCTGT CGATCACGGT CTGCTGGTCA GCGTGGACTC TCTGCCGCAG CTTGATCTGC TGGGGCAGGT GAACCCCGGC GGCAAGGTGA TGATCCGCAT CAATCCCGGC ATCGGCGCGG GACACCACAA AAAGGTTGTC ACCGGCGGCA AGGAAACGAA ATTCGGCATA GGGCCGGACG ACGGCGATGC CGTGCGCCGC ATTCTCAAGC GGCACAACCT GACTCTTGCA GGGCTTAACC AGCACATCGG TTCGCTGTTC ATGGAGCCGG ACAGCTACAT GGAAGCCGTG GAGTTTCTTC TGCGCGAGGC GGAACAGTGG GATTCGCTGG AGGTCATCGA CTTCGGCGGG GGATTCGGCA TTCCGTACCG CAAATATGAA AAACAGCCCC GGCTGGACAT GGAAGCCACG GGCCGCATGC TGGATGACTG CATCGGCAGA TGGGCGGAAC GCACGGGATA CAACGGACGC TTTATGATCG AGCCGGGCCG CTATGTGACC GCTGAGTGCG GCGTGGTACT GGGTACCGTG CATGCCGTCA AAAACAACGG CGAACGCCGT TTTGCCGGTA CAGATCTCGG GTTCAATGTT CTGCAGCGTC CGGTCATGTA CGACGCTTTT CATGATGTGG AGATATACCG CGAAGACGGT GTTCCGCAGC AGGAAACCAT GCAGCAGACC ATCGTGGGCA ATATCTGCGA ATCAGGCGAT ATCATGGCTG CCGCCCGCGA ACTGCCCGAG ATACAGGAAG GCGACATCAT CGCCATGCTG GATGCCGGAG CCTACGGTTT TGCCATGAGT TCCAGCTACA ATCAGCGTCT GCGTCCGGCC GAAGTGCTGG TGGACAAAGA CGGCCGCGAC CGGCTTATCC GCCGCCGCGA AACTCTGGAC GACCTGCTGG CCTGCTTTCC GGAGCATGCG GAAAAGACCG GCGGGTCTGT GCGGGTGGCA GGCGGACGGG GCTAA
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Protein sequence | MSNVRSAVTD ELDFYGLSTP MELVETYGSP LYVYNENVLR RRCRELKGLS SHPGFRVNYS AKANANLSLL RIIRSEGLVV DAMSPGEIAM HLAAGFTPDE ITYVCNNVSA EELRNAVDHG LLVSVDSLPQ LDLLGQVNPG GKVMIRINPG IGAGHHKKVV TGGKETKFGI GPDDGDAVRR ILKRHNLTLA GLNQHIGSLF MEPDSYMEAV EFLLREAEQW DSLEVIDFGG GFGIPYRKYE KQPRLDMEAT GRMLDDCIGR WAERTGYNGR FMIEPGRYVT AECGVVLGTV HAVKNNGERR FAGTDLGFNV LQRPVMYDAF HDVEIYREDG VPQQETMQQT IVGNICESGD IMAAARELPE IQEGDIIAML DAGAYGFAMS SSYNQRLRPA EVLVDKDGRD RLIRRRETLD DLLACFPEHA EKTGGSVRVA GGRG
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