Gene Dde_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2643 
Symbol 
ID3757666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2660300 
End bp2660806 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID637783545 
Productuniversal stress protein UspA-like protein 
Protein accessionYP_389134 
Protein GI78357685 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.795343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCCG TCAAAAAAAT ACTATACGCC ACCGATCTTT CAGAAGATTC CCGCCATGCG 
CTTTCGTACG CGTTCAGTCT GGCGCAACAG TACGGAGCAG CGCTGCATGT GCTGCATGTG
CTGCCGGACG TAAAGCAGAA CTACCTGACC ACATCGGGGC TGGATTTCGC CACAGTGTTT
GACGATGCCA CATGGCGGCT GTTCACTCCG GAACAGCTTG TGGAAGCCAA ACACAAGGTA
AGAGAGCGCA TTACGGGCAT ATGCAGTCTG GAAGGACTGG CGGACACAGC CTGCATGCCC
GTGGCGGAAA ACATCGAGGT GGCCGTGGGG CAACCTGCCG ATGTCATTCT GGAACGCGCC
CCGCAATTTG ACATGGTGGT CATGGGTACT CAGGGACACG GACGGTTGGC CGGTCTGCTG
CTGGGCAGCG TGACCCAGAA AGTCGTTTCG CGCTGCCCGG TGCCTGTTCT GGTGGTCCGC
CTGCCGGAAG CTGATCACAA GGTCTGA
 
Protein sequence
MQPVKKILYA TDLSEDSRHA LSYAFSLAQQ YGAALHVLHV LPDVKQNYLT TSGLDFATVF 
DDATWRLFTP EQLVEAKHKV RERITGICSL EGLADTACMP VAENIEVAVG QPADVILERA
PQFDMVVMGT QGHGRLAGLL LGSVTQKVVS RCPVPVLVVR LPEADHKV