Gene Dde_2639 details

Gene Information

• Locus tag: Dde_2639
• Symbol: thrS
• ID: 3757661
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2655216
• End bp: 2657150
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637783540
• Product: threonyl-tRNA synthetase
• Protein accession: YP_389130
• Protein GI: 78357681
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.3159
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGTTT CCATCGAAGG ATCAGTGGTG GAGGTCGAGT CCGGCGCAAG CTGCCGGGAC 
GTGCTCAAGC AGGCCTTGAG CGGCAAGAAA TTTAAAAAAG TGCTGGCTGC CCGTTGCGGC 
GGCACCATGC TCGATCTGAC CGCGACCGTT CCGACCGCCT GCGAAACCCT TGAGCCTGTC 
TATGCAGACT CGCCCGAAGG GCTTGGTCTT ATCCGCCACA GTGCGGCCCA CGTAATGGCC 
GATGCCGTGC AGCGCCTTTT CCCCGGCGTA AAGGTGACCA TCGGGCCTGC CATTGAAAAC 
GGCTTCTATT ACGATTTCGA CTACGAGCGT CCGTTCACCG CAGATGATCT TGAAGCCATC 
GAAGCAGAGA TGGACAAGAT CATCAAGGCG GCGCATCCGT TCGAGCGCAG TGTCATGTCC 
AAGGATGAGG CAAAGAAAAT GTTTGCCGAC ATGGGCGAGA CCTACAAGCT TGAGCTTATC 
GACGCCGTGC CCGACGATAT TGTTTCCATT TACCGCAGCG GCGACTTTGT CGACCTGTGC 
CGCGGTCCTC ATATTCCCGA TACCGGCTGT ATCAATGCCT TCAAGCTGAT GTCCGTTGCC 
GGCGCCTACT GGCGCGGTGA TGAAAAGAAT GCCATGCTTT CGCGTGTGTA CGGCACGGCT 
TTTCCTGATG AAAAAGAGCT GAAAAGCTAT CTGAACAGAA TAGAGGAAGC GAAAAAGCGT 
GACCACCGCA AGCTGGGCAC GCAGCTTGAC CTGTTCAGCT TTCAGGAAGA AGGCGGCTCG 
GGCATGGTGT ACTGGCATCC CAAAGGGGCG CTTGTGCGCG CCATTCTGGA AGACTTCGAG 
CGTAAGGAAC ACCTGAAGCG CGGCTACCAG ATTGTGCAGA CGCCGCAGAT TTTGCGCCGC 
GAGCTGTGGG AAAAATCCGG TCACTATGAC AACTACCGTG AAAACATGTA TTTTACGGAT 
ATTGATGAGC AGCCCTACGG CGTAAAGCCC ATGAACTGCG TGGCTCATAT GCTCATCTAT 
AAATCACGCA GCCACAGCTA CCGCGACCTG CCCGTACGCC TTTTTGAGCT GGGCGTGGTG 
CACCGCCATG AAAAAAGCGG TGTTCTGCAC GGATTGCTGC GGGTGCGCCA GTTCACGCAG 
GATGATGCGC ACATCATCTG CACTCCTGAC CAGCTGGAAA GCGAAATCGT GGGTGTGCTG 
AATTTTGTGC GGGATGTCAT GGGCGTGTTC GGCTTTGAAT ATTCCATGGA AGTGAGCACC 
CGTCCCGAAA AGTCCATCGG TTCCGACGAA GACTGGGACC GCGCCACCAG CGCGCTTGTG 
AAGGCGCTGG AAGGGCAGGG ACTGCCCTAC GAGATTAACG AGGGCGACGG CGCCTTTTAC 
GGGCCTAAAA TTGACGTAAA ACTGCGCGAC TGCCTGGGCA GAGAGTGGCA GTGCGCCACG 
GTGCAGTGTG ATTTCACCTT GCCTGACCGC TTTGATCTGG TGTACATCGG ACAGGATGGT 
GAACGCCATC GACCGGTTAT GGTGCATCGC GTCATTCTTG GCTCGGTTGA GCGTTTCATC 
GGTGTGCTTA CAGAGCATTT TGCCGGTGCC TTCCCCACGT GGCTGGCTCC TGTTCAGGCA 
CGTCTGCTCA CCGTGACGGA CGCCCAGAAC GAGTTTGCCG AAGAAGCCCG CGCCGCTCTT 
ATGGCGCAGG GTATCCGCGT GGAAGTGGAC ACCCGCAATG AAAAACTCGG CTACAAGGTA 
CGTGAGGCAC AGCTGGAAAA GATTCCCTAC ATTCTCGTCA TCGGTGACAA GGAAGTGGAA 
GCCCGCGGCG TGAACGTGCG CCTGAGAAAG GGTGATAATC TTGGCCTTAA GACGCTGGAT 
GAGGTAGTGG ACATCATCAG GGCCGATTGT GAGGAACCGT TTAAAAGTGG AGGGATGCGC 
TATAGCTTCT CCTAA 

 

Protein sequence

MKVSIEGSVV EVESGASCRD VLKQALSGKK FKKVLAARCG GTMLDLTATV PTACETLEPV 
YADSPEGLGL IRHSAAHVMA DAVQRLFPGV KVTIGPAIEN GFYYDFDYER PFTADDLEAI 
EAEMDKIIKA AHPFERSVMS KDEAKKMFAD MGETYKLELI DAVPDDIVSI YRSGDFVDLC 
RGPHIPDTGC INAFKLMSVA GAYWRGDEKN AMLSRVYGTA FPDEKELKSY LNRIEEAKKR 
DHRKLGTQLD LFSFQEEGGS GMVYWHPKGA LVRAILEDFE RKEHLKRGYQ IVQTPQILRR 
ELWEKSGHYD NYRENMYFTD IDEQPYGVKP MNCVAHMLIY KSRSHSYRDL PVRLFELGVV 
HRHEKSGVLH GLLRVRQFTQ DDAHIICTPD QLESEIVGVL NFVRDVMGVF GFEYSMEVST 
RPEKSIGSDE DWDRATSALV KALEGQGLPY EINEGDGAFY GPKIDVKLRD CLGREWQCAT 
VQCDFTLPDR FDLVYIGQDG ERHRPVMVHR VILGSVERFI GVLTEHFAGA FPTWLAPVQA 
RLLTVTDAQN EFAEEARAAL MAQGIRVEVD TRNEKLGYKV REAQLEKIPY ILVIGDKEVE 
ARGVNVRLRK GDNLGLKTLD EVVDIIRADC EEPFKSGGMR YSFS