| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2630 |
|---|
| Symbol | pgk |
|---|
| ID | 3757652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2645441 |
|---|
| End bp | 2646685 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637783531 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_389121 |
|---|
| Protein GI | 78357672 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.462751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGATC ACATTCGCAC CTTTTTTATG CTGTATCCTT CAGTCTTAGC CCGCAGGAGA
CTTCATATGA ACGTACTGAA AATGACTGAT CTTGATCTGC GCGGAAAGCG TGTGCTTATC
CGCGAGGACC TGAACGCTCC CATCAAGGAC GGGGCGGTGG CCAACGACAA CAGGCTGCGC
GCAGCCGCAC CTACCATCCG CCTTGCCATG CAGGCAGGAG CACGGGTTAT GGTGATGTCG
CATCTGGGCC GCCCGGCAGA AGGCGCGTTT GACGAATCGG CATCCATGGC ACCTGTGGCG
GCACGGCTGG CCGATATTCT GGGCTGCCCC GTGCCGGTGG TGCGGGACTG GCTGGACGGG
GTGGATGTGC CCGAAGGCGG CGTGGTGCTG ACAGAGAATG TACGCTTCAA CAAGGGCGAA
AAAAAGAACG ACGAAGAGCT GGGCAGGCGC ATGGCGGCCC TGTGCGATGT TTATGTGATG
GATGCTTTCG GCACGGCGCA CCGTGCGCAG GCTTCCACCC ATGCCGTTGC CGCATTTGCT
CCCGTGGCCT GCGCGGGTCC GCTGCTGGCG GCGGAGCTGG AAGCTCTGGG CAAGGCTCTT
GGCGCCCCGC GCCACCCTGT GGTTGGCATC ATCGGCGGTT CCAAGGTCTC GACCAAGCTC
ACTCTGCTGG AAACGCTTTC CTCCAAGGTC GACAAGCTTA TTGTGGGCGG GGGCATTGCC
AATACGTTTA TCCGTGCCGC AGGTTTTGCC GTGGGCAAAT CACTGTATGA AGAAGATCTG
GTGGCCGAAG CCGCCCGCCT GATGCAGGCC GCAGCCGCAG CCGGAGGAGA GATTCCCGTG
CCTGTGGATG TGGTGGTGGC CACGGAGTTT GCCGAAACTG CAACGCCTGT CTGCAAGCCG
GTGGATCAGG TGGCCGATAA TGAGATGATT ATGGACATCG GGCCGCAAAC CGCCGCCATG
TATGCAGAGG TGCTGCGCGG AGCAGGAACC ATCGTGTGGA ACGGACCTGT CGGGGTGTTC
GAGTTTGATG CCTTCGGTGC CGGTACAGAA GCGCTGTGCA GGGCTGTGGC GCAAAGCAGC
GCCTTTTCCA TCGCCGGCGG CGGTGACACT GTGGCCGCTG TGGATAAATA CGGCGTCCGT
GACGGCGTAT CCTATATATC CACGGGCGGA GGGGCTTTTC TGGAGTTTCT GGAAGGCAAG
GAGCTGCCGG CAGTGGCCAT GCTGGAACAG CGCGCAAAAG CCTGA
|
|---|
| Protein sequence | MHDHIRTFFM LYPSVLARRR LHMNVLKMTD LDLRGKRVLI REDLNAPIKD GAVANDNRLR
AAAPTIRLAM QAGARVMVMS HLGRPAEGAF DESASMAPVA ARLADILGCP VPVVRDWLDG
VDVPEGGVVL TENVRFNKGE KKNDEELGRR MAALCDVYVM DAFGTAHRAQ ASTHAVAAFA
PVACAGPLLA AELEALGKAL GAPRHPVVGI IGGSKVSTKL TLLETLSSKV DKLIVGGGIA
NTFIRAAGFA VGKSLYEEDL VAEAARLMQA AAAAGGEIPV PVDVVVATEF AETATPVCKP
VDQVADNEMI MDIGPQTAAM YAEVLRGAGT IVWNGPVGVF EFDAFGAGTE ALCRAVAQSS
AFSIAGGGDT VAAVDKYGVR DGVSYISTGG GAFLEFLEGK ELPAVAMLEQ RAKA
|
|---|
| |