Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2609 |
Symbol | aroK |
ID | 3757631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2627351 |
End bp | 2627899 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783510 |
Product | shikimate kinase |
Protein accession | YP_389100 |
Protein GI | 78357651 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0706478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA ATACATATAT TCCCCGTCCC GAACCATCAG AACAGGACGG GTGCATTATC CTCATCGGCA TGGCCGGTTG CGGCAAAAGC ACCATAGGCG CGGCGCTGGC CCGGCACATG AACTGGGCAC ACATGGACAG TGATCATCTG ATAGAAGCCC ATTACGGCAC CACCCTGCAG CAGGTTGCCG ACAGTATGGA CAAAGAGACC TTTCTGGACG TGGAAAGCGC CGTCTGCCGG CGTATAAACG TACGGCGTAC CGTCATATCG ACCGGCGGCA GCGTGGTGTA CAGAGCCGCG GGAATGGCAC ATCTGAAGTC ACTGGGGCCT GTGGTGTACC TGCAGGTTGA TCTGCCGGTG ATACTGGAAC GCATAAGCCG CAACCCTGAC CGGGGTCTGG CCATCGCCCC CGGGCAGACT GTTGAAGACC TGTACAACGA ACGCATCGCC CTGTATGAAA CCTATGCCGA TATAACCGTT CCGTGCACCA CTGCCGGTGT ACAGGAATGT GTCACGGCCA TCAGCAGACT GCTGACGGAG TTGAGATGA
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Protein sequence | MTQNTYIPRP EPSEQDGCII LIGMAGCGKS TIGAALARHM NWAHMDSDHL IEAHYGTTLQ QVADSMDKET FLDVESAVCR RINVRRTVIS TGGSVVYRAA GMAHLKSLGP VVYLQVDLPV ILERISRNPD RGLAIAPGQT VEDLYNERIA LYETYADITV PCTTAGVQEC VTAISRLLTE LR
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