Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2562 |
Symbol | |
ID | 3757579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2580209 |
End bp | 2581312 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783458 |
Product | pyridine nucleotide-disulfide oxidoreductase |
Protein accession | YP_389053 |
Protein GI | 78357604 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | [TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.616641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGAC TGCTGCTGCT GGGAGCAGGT CATGCGCACA TGACCGTCAT GGCGCACCTG CCCGAAATAA TTGCCAGAGG ACACACAGTG ACGGCGGTCG GCCCGCTGAG CAGACATTAT TATTCGGGCA TGGGTCCCGG CATGCTTGGT GGTGCCTATA CGCCGGAGGA CATCAGCTTT CCCGTCGAAC AGATGATCGA ATCGCGCGGC GGCGAGTTCA TCCGTGACAA AGCCGTGCGC GTTGATGCCG CTGCCAAAAC AGTTACGCTG CAAAGCGGCC TTGAAGTGGC ATACGATGTC TGTTCGTTCA ACACCGGCTC ATCTGTTCCC GTTTCCATAG TTCAGCAAGA CGCTGAAGAC GTCTATACCG TCAAGCCCAT CGAAAACCTG CTGGCCGGAC GCAACCGCAT TCTGGAGCTG GCAGCAAAGG ACACGGTACG CATAGGCGTG GTGGGCGGCG GTCCCGCAGC GCTGGAAGTG GCCGGAAACG CTGCCGCCTG CGCCCGCGAA TCCGGCGGCA AGGGCGCATC CGTCCGGCTG TATGCCGGAA AACGTTTTCT GCGCGGGCTC ACGCCCCGCG TCCGCTCACT GTGTCTGCGC CAGATGCACA GACATAATGT GGAAATACTC GAAGGCAGCT ATGCTTCTGG CATTGCCACG GGCAAAGTAA CCCTCGAAGA CGGCAGAACT TTTGCCGAAG ATATCATCTT TGTGGCCATG GGGGTCAAAC CCTCTGCCCT TATCACCGCA TCGGGGCTGC CCGCAGGTGA CGACGGTGGT CTGGCGGTAA ACCGTTTTCT GCAATGCGAC GAACACCCCG ACCTGTTCGG CGGCGGCGAC TGCATCTGGT TCAAAGAACG CCCGCTGGAC AAGGTGGGCG TGTATGCCGT GCGCGAAAAC CCCGTGCTGT ACCACAACCT GCTGGCACGG CTGGAAGGCG GAGAACTGCA GCCTTTTGAC CCGGGCGGAG ACTATCTGCT GATTTTCAAT ACCGGCGGCG GTACGGGCGT ACTGCACAAG TCGGGAGTAT CCTTCGGCGG CAGACTGGCT TTTGTCATCA AGGACTGGAT AGACCGCCGG TTCATGCGTG AATTCCAGCC TTAG
|
Protein sequence | MARLLLLGAG HAHMTVMAHL PEIIARGHTV TAVGPLSRHY YSGMGPGMLG GAYTPEDISF PVEQMIESRG GEFIRDKAVR VDAAAKTVTL QSGLEVAYDV CSFNTGSSVP VSIVQQDAED VYTVKPIENL LAGRNRILEL AAKDTVRIGV VGGGPAALEV AGNAAACARE SGGKGASVRL YAGKRFLRGL TPRVRSLCLR QMHRHNVEIL EGSYASGIAT GKVTLEDGRT FAEDIIFVAM GVKPSALITA SGLPAGDDGG LAVNRFLQCD EHPDLFGGGD CIWFKERPLD KVGVYAVREN PVLYHNLLAR LEGGELQPFD PGGDYLLIFN TGGGTGVLHK SGVSFGGRLA FVIKDWIDRR FMREFQP
|
| |