Gene Dde_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2562 
Symbol 
ID3757579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2580209 
End bp2581312 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content60% 
IMG OID637783458 
Productpyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_389053 
Protein GI78357604 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.616641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAC TGCTGCTGCT GGGAGCAGGT CATGCGCACA TGACCGTCAT GGCGCACCTG 
CCCGAAATAA TTGCCAGAGG ACACACAGTG ACGGCGGTCG GCCCGCTGAG CAGACATTAT
TATTCGGGCA TGGGTCCCGG CATGCTTGGT GGTGCCTATA CGCCGGAGGA CATCAGCTTT
CCCGTCGAAC AGATGATCGA ATCGCGCGGC GGCGAGTTCA TCCGTGACAA AGCCGTGCGC
GTTGATGCCG CTGCCAAAAC AGTTACGCTG CAAAGCGGCC TTGAAGTGGC ATACGATGTC
TGTTCGTTCA ACACCGGCTC ATCTGTTCCC GTTTCCATAG TTCAGCAAGA CGCTGAAGAC
GTCTATACCG TCAAGCCCAT CGAAAACCTG CTGGCCGGAC GCAACCGCAT TCTGGAGCTG
GCAGCAAAGG ACACGGTACG CATAGGCGTG GTGGGCGGCG GTCCCGCAGC GCTGGAAGTG
GCCGGAAACG CTGCCGCCTG CGCCCGCGAA TCCGGCGGCA AGGGCGCATC CGTCCGGCTG
TATGCCGGAA AACGTTTTCT GCGCGGGCTC ACGCCCCGCG TCCGCTCACT GTGTCTGCGC
CAGATGCACA GACATAATGT GGAAATACTC GAAGGCAGCT ATGCTTCTGG CATTGCCACG
GGCAAAGTAA CCCTCGAAGA CGGCAGAACT TTTGCCGAAG ATATCATCTT TGTGGCCATG
GGGGTCAAAC CCTCTGCCCT TATCACCGCA TCGGGGCTGC CCGCAGGTGA CGACGGTGGT
CTGGCGGTAA ACCGTTTTCT GCAATGCGAC GAACACCCCG ACCTGTTCGG CGGCGGCGAC
TGCATCTGGT TCAAAGAACG CCCGCTGGAC AAGGTGGGCG TGTATGCCGT GCGCGAAAAC
CCCGTGCTGT ACCACAACCT GCTGGCACGG CTGGAAGGCG GAGAACTGCA GCCTTTTGAC
CCGGGCGGAG ACTATCTGCT GATTTTCAAT ACCGGCGGCG GTACGGGCGT ACTGCACAAG
TCGGGAGTAT CCTTCGGCGG CAGACTGGCT TTTGTCATCA AGGACTGGAT AGACCGCCGG
TTCATGCGTG AATTCCAGCC TTAG
 
Protein sequence
MARLLLLGAG HAHMTVMAHL PEIIARGHTV TAVGPLSRHY YSGMGPGMLG GAYTPEDISF 
PVEQMIESRG GEFIRDKAVR VDAAAKTVTL QSGLEVAYDV CSFNTGSSVP VSIVQQDAED
VYTVKPIENL LAGRNRILEL AAKDTVRIGV VGGGPAALEV AGNAAACARE SGGKGASVRL
YAGKRFLRGL TPRVRSLCLR QMHRHNVEIL EGSYASGIAT GKVTLEDGRT FAEDIIFVAM
GVKPSALITA SGLPAGDDGG LAVNRFLQCD EHPDLFGGGD CIWFKERPLD KVGVYAVREN
PVLYHNLLAR LEGGELQPFD PGGDYLLIFN TGGGTGVLHK SGVSFGGRLA FVIKDWIDRR
FMREFQP