| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2506 |
|---|
| Symbol | |
|---|
| ID | 3757523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2527981 |
|---|
| End bp | 2529726 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637783403 |
|---|
| Product | sulfate permease |
|---|
| Protein accession | YP_388998 |
|---|
| Protein GI | 78357549 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.037188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCTC AAAATGTGGC CTCGGACAGG GAAGGGTTCC TGCCCAAGGC CATTTCTGTT
CTCCGTCAGG GATATTCCCG CCAGAACTTC CTGCGCGACC TCGGCTCCGG TGCCACCGTG
GGCATAGTCG CCCTGCCGCT GGCCATGGCG TTTGCCATCG CTTCCGGCAC CACGCCCGAA
AAAGGACTTT TTACCGCCAT CGTCGCAGGC TTTCTTATCT CTGCGCTGGG CGGCAGCCGC
TATCAGATAG GCGGCCCCAC GGGTGCGTTT GTCGTCATCA TTTTCAACAT CATCTCCAGA
CACGGTTTTG ACGGCCTGCT GCTGACCACC ATAATGGCCG GAATCATCCT TATTATTTTC
GGAGTGTTGC GACTCGGAAC CCTGATCACG TTCATTCCCT ATCCTGTGAC CACCGGCTTT
ACCGCAGGCA TCGCACTGCT CATATTTTCA TCACAGATAA ACGATTTTCT GGGCATGCGG
CTTGATGTGA TACCCCCGGA CTTTATCGGA AAATGGCAGG CATACTTCGG ACATGCTGGT
GCCATTGATC CGGTAACCGC AGCTGCCGCC CTGCTGACGC TGGGTATCAT CATCGGCGTA
CGGCAGTTTG TTCCCCGCAT TCCCGCTCCG GTTGCGGCCG TGGCAGCCGT ATCAGTACTA
GCAGCCGCGT GCGGCGCACC TGTGGAAACA ATCGGCAGCA GATTCGGCGG CATACCGCAG
ACACTGCCGT CATTTGCCCT GCCCGACTTT TCATGGGCGC AAGTACGCAT ACTGCTGCCC
GACGCGCTTA CCGTGGCACT GCTGGCCGGC ATTGAATCGT TGTTGTCGTG CGTGGTGGCC
GACGGCATGA CAGGCAGCCG GCACAACGCC AACACTGAAC TGGTAGCACA GGGCACGGCA
AACATCGCAT CCGCACTTTT CGGCGGCATT CCCGCCACAG GCGCCATTGC CAGAACAGCC
ACAAACATCA GATCGGGGGC TTTCTCGCCT GTCTCGGGCA TGATTCACTC TGCGGTTCTT
GTACTGTTTG TACTGCTGCT GGCTCCGGCC GCGGGGTACA TTCCGCTGGC ATGCCTCGCC
GCCGTACTTG TTGTGGTGGC GTGGGACATG AGCGAAATTC ACAAATTCAT GCGCCTGCTG
CGCGCCCCGA AGCCTGATGT GCTGGTCATG TGCCTTACAT TCGGACTTAC GGTGGCCGTC
GACCTTACCG TGGCCGTCAA TGTGGGAGTT GTTCTGGCTT CTTTGCTCTT CATGCAGCGC
ATGAGCAAAG TCACGCGCAT CCGCGAATCA GATGGCGAGC CTGCCGCCGA GACATGGGCT
GAAGAAGACC CCGTAAGTGA TGTCCCGCAG GGGGTGCGCA TCTATGAAAT TGACGGGCCA
TTCTTCTTCG GTGTGGCTGA TAGGTTTAAA AGCGTTCTTG ATATCATGGA AAAATCACCG
GCCGTCTTTA TATTGCGCCT GCGCAAAGTG CCCACAGTAG ACTCCACGGC CATCAACGCT
CTGGAACTGC TGCATGCCCG CTGCAAAGCC AACGGAACAG TGCTGCTGCT TTCCGGCCTG
CGCAAGGCCC CGCTGCAGGA ATTACAGCGG CTCGGAACAC TGGACATTAT CGGCCGCCGC
AACATTATGC CGGACATAAA CGCAGCCCTT GAACGGGCAC GCGCCATCAC CGGCACACAT
GACAGGACAC ACAGGCAGCC GGACCGCCAC AGCTCATCCG GCCGCACCGC TTCTTCCCTT
TCCTGA
|
|---|
| Protein sequence | MHSQNVASDR EGFLPKAISV LRQGYSRQNF LRDLGSGATV GIVALPLAMA FAIASGTTPE
KGLFTAIVAG FLISALGGSR YQIGGPTGAF VVIIFNIISR HGFDGLLLTT IMAGIILIIF
GVLRLGTLIT FIPYPVTTGF TAGIALLIFS SQINDFLGMR LDVIPPDFIG KWQAYFGHAG
AIDPVTAAAA LLTLGIIIGV RQFVPRIPAP VAAVAAVSVL AAACGAPVET IGSRFGGIPQ
TLPSFALPDF SWAQVRILLP DALTVALLAG IESLLSCVVA DGMTGSRHNA NTELVAQGTA
NIASALFGGI PATGAIARTA TNIRSGAFSP VSGMIHSAVL VLFVLLLAPA AGYIPLACLA
AVLVVVAWDM SEIHKFMRLL RAPKPDVLVM CLTFGLTVAV DLTVAVNVGV VLASLLFMQR
MSKVTRIRES DGEPAAETWA EEDPVSDVPQ GVRIYEIDGP FFFGVADRFK SVLDIMEKSP
AVFILRLRKV PTVDSTAINA LELLHARCKA NGTVLLLSGL RKAPLQELQR LGTLDIIGRR
NIMPDINAAL ERARAITGTH DRTHRQPDRH SSSGRTASSL S
|
|---|
| |