Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2499 |
Symbol | |
ID | 3757516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2523135 |
End bp | 2525516 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783396 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_388991 |
Protein GI | 78357542 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0539678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AACAACTTTC CGAGCGCGAT ATCTGCACGA AGTACATCAC TCCTGCCCTT GAGAAGGCTG GCTGGGATGT TACCACTCAG GTCCGTGAAG AGTTTCCTCT CACCAAGGGA CGCATCATCG TGCGTGGCAA GCTGCATACC CGCGCCAAGC ACAAACGCGC CGATTATGTC CTGTTTTACA AGCCGAACAT CCCCATTGCC ATTATCGAGG CCAAGGACAA CAACCACACG GTTGGCGACG GCATGCAACA GGCGTTGGGC TACGCCGACA TGCTGCAAGT GCCTTATATA TTTAGCTCCA ATGGCGACGG TTTTCTTTTC CACAACAAAA TTGCTCTGGA CGGCATTGTC GAGCGTGAAC TTGCTCTCCA CGAATTCCCC GCTGCGGAGA TGCTGTGGCA ATGGTGGGTA CAGCACCGTG GCCTGAACGA TCAGCAGAAT GCACTGGTCA CGCAGGATTA TTTCAGCGAC GGCAGCGATA AAAGTCCACG CTATTACCAG TTGCTGGCCA TCAACAAGAC CATCGAGGCG ATAGCACGGG GCCAGAATCG CATTCTACTG GTGATGGCCA CCGGTACCGG CAAGACCTTC ACCGCCTTCC AGATCATTTG GCGGCTGTGG AAGTCCAAGG CGAAAAAACG CATCCTGTTT CTTGCCGACC GTAACATCCT GGTCGACCAG ACCATGACCA ACGACTTCAA GCCGTTCGGT TCGGCCATGA CCAAGATCCA AAAGCGGCAG GCCAACAAGT CCTACGAGAT TTACCTTTCC CTATATCAAG CCGTTACCGG CAACGAGGAA GAGAAAAACA TCTACCGGCA GTTCAGCCCC GATTTTTTCG ACCTCATCAT CATTGATGAA TGCCATCGGG GCAGTGCTGC CGCCGATTCG GCCTGGCGTG AAATTCTCGA ATATTTCACT TCCGCTACCC AGATCGGCCT TACCGCCACG CCCAAGGAGA CCAAAGAAGT CTCCAACATC GACTACTTTG GCGACCCCAT CTATACCTAC AGCCTCCGGC AGGGCATTGA CGACGGTTTC CTTGCTCCCT ACAAGGTCGT GCGCATCGAT CTTGACCGCG ATTTAACAGG TTGGCGGCCC GACAAGGGCA TGATCGACAA GTACGGCAAC GAAATCGAAG ACCGTATCTA CAACCAGAAA GATTTCGACA AGACCCTTGT CCTTGAACAG CGTACCCGGT TGGTGGCAAA AAAGATCACC GAGTTCCTCA GACAAACCAA CCGCTTCGAC AAAGCCATCG TCTTCTGTGA AAACATCGAC CATGCCGAAC GCATGCGTCA GGCCCTGGTC AATGAAAACG CCGACCTGGT GGCGCAGAAC AGCAAATACG TCATGCGCAT CACCGGCGAC AACGAGGAAG GCAAGGCCGA ACTGGACAAC TTCATCTTCC CGGAGAGCAA ATACCCGGTT ATTGCCACCA CCTCCAAGCT GATGACTACC GGTGTCGATG CACAGACCTG TAAACTCATT GTGCTCGACC AGCGCATTCA GTCCATGACC GAGTTCAAGC AGATCATCGG GCGCGGCACC CGCATCAACG AAGATTACGG CAAGTACTAC TTCACCATCA TCGACTTCAA GAAGGCCACC GAGCTGTTTG CCGACCCTGA TTTCGACGGT GACCCGGTGC AGATTTACGA ACCCAGCGGG GATCAGTCAC CGGTTCCGCC GGATGTTCCT GTTGATCCTG AAGTTGACGG TGGCGTCACC TATCCGGAAC CCGGAGAAGA CCAGGGTTGG ACCGGCGTCG CTGAACCCGG CCCAGGTGAG GAAGGCGGCA TTCGCCGTTA CGTTGTGGCC AATGTCGAGG TCAAGGTCGC CGCCGAACGC GTCCAGTATT TCGACGCCAA CGGCAAACTG ATCACCGAAT CCCTCAAAGA TTACACCCGC AAGGCCCTGG CCAGGGAGTA CGCCACCCTC GACGATTTTC TCCGCCGTTG GAGCAGCACC GAGAAGAAGC AGGCCATCAT CGACGAACTG TCAGAACAGG GCGTGTTCTT CGATGCCCTT GCCGATGAGA TCGGGCGGCA ATCCGGAAAA GCCTTCGACC CCTTCGATCT GGTCTGCCAT GTCGCCTGGG ATATGCCGCC GCTCACCCGC AAGGAGCGGG CGGAACAGGT GAAGAAACGC AACTACTTCA CCCGCTACGG AGAGCAGGCC CGCCGGGTGC TGGAGGCCCT GCTCGACAAG TATGCCGATG AAGGCGTGGC CCACATCGAA GAGACGCAGA TTCTCACCAT TGCCCCCTTT ACCGAATTCG GCACCCCGCT GGAAATCATC CGCGCCTTTG GTGGGCTGGA TCAGTATCAG CAGGCTGTCA ACGAACTGGA ACAGGCCCTC TATAGCGCCT GA
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Protein sequence | MNKKQLSERD ICTKYITPAL EKAGWDVTTQ VREEFPLTKG RIIVRGKLHT RAKHKRADYV LFYKPNIPIA IIEAKDNNHT VGDGMQQALG YADMLQVPYI FSSNGDGFLF HNKIALDGIV ERELALHEFP AAEMLWQWWV QHRGLNDQQN ALVTQDYFSD GSDKSPRYYQ LLAINKTIEA IARGQNRILL VMATGTGKTF TAFQIIWRLW KSKAKKRILF LADRNILVDQ TMTNDFKPFG SAMTKIQKRQ ANKSYEIYLS LYQAVTGNEE EKNIYRQFSP DFFDLIIIDE CHRGSAAADS AWREILEYFT SATQIGLTAT PKETKEVSNI DYFGDPIYTY SLRQGIDDGF LAPYKVVRID LDRDLTGWRP DKGMIDKYGN EIEDRIYNQK DFDKTLVLEQ RTRLVAKKIT EFLRQTNRFD KAIVFCENID HAERMRQALV NENADLVAQN SKYVMRITGD NEEGKAELDN FIFPESKYPV IATTSKLMTT GVDAQTCKLI VLDQRIQSMT EFKQIIGRGT RINEDYGKYY FTIIDFKKAT ELFADPDFDG DPVQIYEPSG DQSPVPPDVP VDPEVDGGVT YPEPGEDQGW TGVAEPGPGE EGGIRRYVVA NVEVKVAAER VQYFDANGKL ITESLKDYTR KALAREYATL DDFLRRWSST EKKQAIIDEL SEQGVFFDAL ADEIGRQSGK AFDPFDLVCH VAWDMPPLTR KERAEQVKKR NYFTRYGEQA RRVLEALLDK YADEGVAHIE ETQILTIAPF TEFGTPLEII RAFGGLDQYQ QAVNELEQAL YSA
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