Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2488 |
Symbol | |
ID | 3757504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2508341 |
End bp | 2509027 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637783384 |
Product | hypothetical protein |
Protein accession | YP_388980 |
Protein GI | 78357531 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000155229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTTTTC CTACTGGTTC GCTGGTTAAC CTTATTGCCA TAGTGCTGGG CAGCTGCGCC GGCATGCTGT TGGGAAACCG CCTGCCCGAG AGGGTGCGGT ACATTGTTTT CTGTGGTCTG GGGCTGGCGA CGCTGGTTAT CGGCATGCAG ATGGCACTGA AAACCCAGAA TCCTCTGATT CTGGTGTTCA GTATTCTTCT GGGTGGCATC ACGGGAGAAC TGCTTCAGAT TGAACGGGGA CTGAACAGTC TGGGCGAGCG TCTTAAAAAG CGTCTGAAAT CAAACAATTT ACGTTTTGTT GACGGGTTTG TTTCTGCCAC GCTGCTTTTT GTCATCGGCT CCATGGCCAT ACTGGGGCCG TTTGACGAGG CACTGCGCGG AGACCGGACA CTGCTGTACA CCAAGTCCAT TCTGGATTGC TTTGCCTCTG TACCGCTGGC GGCCAGTTTC GGTTCCGGCG TTTTATTTTC CGCCGTTCCC GTTTTTCTTT ATCAGGGGGC GCTCACCCTG TTTGCGGGTG TGCTCCAGCC CATGCTCACT CCGGCAATGA TGAATGAGAT TATTGCAACC GGGGGCCTGA TGATTCTGGG CATTGCGCTG GGTCTTCTGG ACGTCAAGCG CATCCCTCTT TCCAACCTGT TGCCTTCGCT GGTTTACGCA GGCGTTCTTT CCTACTTTTT CATGTAG
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Protein sequence | MVFPTGSLVN LIAIVLGSCA GMLLGNRLPE RVRYIVFCGL GLATLVIGMQ MALKTQNPLI LVFSILLGGI TGELLQIERG LNSLGERLKK RLKSNNLRFV DGFVSATLLF VIGSMAILGP FDEALRGDRT LLYTKSILDC FASVPLAASF GSGVLFSAVP VFLYQGALTL FAGVLQPMLT PAMMNEIIAT GGLMILGIAL GLLDVKRIPL SNLLPSLVYA GVLSYFFM
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