| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2447 |
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| Symbol | |
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| ID | 3757463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2470005 |
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| End bp | 2472602 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637783343 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_388939 |
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| Protein GI | 78357490 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGA ACAATAATGC AACCGGCCCG CAGCAGATTT CTGCGGACAC GTTTTCTATT
CTGGCTGCCG TTTACGGACA CAGCCCGGCC GGTACAGGTG TCTTTTCGCA CGACGGCGCA
TTGGTGTATG CCAATGGCGC CTGGTCCGGT CTTCTCGGTT CGGGCGCTCT GCCCGCAGAT
TTTTTCCGCC TTGCTCCCGG CTGCGGGGCT CTTTTTGCAT CGGTGGCAGA CGGCAGCCGG
CAGCGCTGGA GCGGCAGCCT GCCTGTTCAG CTTGCTTCCG GCAGGCAGCT TTTCCGGGCG
CGGCTTTTCG CCTTGTCCGG CCATGCGCTG TTGCACGGGC TGGTGGTGGC CGAACTTTCA
GGTATGCAGC AGGAAAACGC GCCTGCTGCC GGTTGCGATG TCTGTCCGTC GTGGCAACTG
CCCGTACAGT TGTATGCTGC GCCTCATGCA CTGCATGACA GGCTCGAAGC TGTTTTTTCC
GTACTTATGC ACCGGCTGGA CTGCAGCTGT GCCACGTTGT GGCTGGCACC GCAGGGTGAC
GAGCCGGCCG TGCTGCTGCA TGCGCCGGAC GGTGCCGGTG CACGCTATTC ATCCCGTCTT
TTCGGTGCTT CGTTTGCACG CCATGTGCTT GCTCAGGGCG ATATTGTCGT GCTGGACAAA
GCCGGCGCGA TGCGCCTTGC CGAGTCTGGC ATACTGCCTG CCGATGTGCC GCTGCCCGCT
GCCGCCATTG CTGCACCGCT GTGTTCGCCG GACGGCAGAA CAATGGGGGT GCTTACCGCA
TGCAGGCGCA ACTCCGCTGT GCGTTTCGGC ATGAATGATG CGCGTTTTCT GCGTAACGCC
GCCAATATCA TGGCCACGGT TGAGCGCATC CACCAGAGCG AAACAGCCTT GCGTGAAAGC
GAGACCCGTT TTCGCGCCGT GTTTGACCAT GCCGGACTGG GCATTGTTCT GCTGACCCCG
CAGGGAACGG TGAAGAGCGT GAACAAAGGC GCTGCCGACC TTGCCAGTAT TCCCGCGGCA
GAAATGCTGG GCCTGCATTA TTCCGATTTC CTCTGCGCCG ACGATGTGAC CGTGGCGGAC
CGCTTTTTTC ATGCGTTGCA GGGCGGTGCG GACGAGGTGC TGACCATGAC CTCGGCCATC
AGGCGCAGGC ATGCTCCGCC CATATGGTGC AAACTGACGG TGAGCCGGGT ACTGGACGAA
GGCGGCAGTC TGCGTTTTAT CATAGTGCAG ATAGAGGATG TGACGGACCA CAAGCGCGAA
GACGAGCGTC TGACGCACAT GGCCTATCAT GATGTGCTGA CGGGGCTGCC CAACAGGGCG
CTTTTTCTCG ACCGCCTGCA GAGTGCGTTC AACCGTGCGC AGCGTAACGC GTCATACAGC
TTTGCCGTGC TCTACATGGA CATGGACGGT TTCAAGGATG TGAACGATTC CATGGGGCAT
GATGCCGGCG ACGCACTGCT GGGCATGTTT GCGGAACGGG TTGGCAACTG CCTGCGCAAT
GTGGACACCC TTGCACGGCT GGGCGGTGAC GAATTTGCCG TGCTGCTGGA TGATGTGCCG
GAGATTCTGC AGGTGACGCA CGTTATCGAG CGTATCACCG AGGCCGTTTC ATCCCCGTTT
ATGCTGCGCG GGCGCGAGAT ACGCTGCGGC GTGAGCATAG GTGCAGTGCT TCGCGGGCAG
GAATGTTCCG GTTGCGGTGA TCTGCTGCGG CAGGCGGATT CCGCCATGTA CAAAGCCAAG
CGGCGGGGGT CCAACAGGTA TGTCATTGCC GGTTCTTCCG ACGCCGCGGC CGCGCGCGTC
ATGCGCAAAG GCGAACAGGA ACTGGTGACA GCGCTGGACA GCGGACAGCT GGAGTTGTTT
TTTCAGCCTG TTGTTTCGTT GCAGACCGGC AGGATGGACG CCGTGGAGGC GCTGGTACGC
TGGCATCATC CCGAGCGGGG GCTGCTGGCT CCCGGGGCTT TTTTGCCGCT GGCGGAACAC
GCTGGTCTGC AGGCTGCGCT GGATGCTCAT GTGCTGCGGC TTGCCGCACG GGCACAACTG
GCCATGCAGG AGCAGGAAGC ACGGGGGGCG GCTGTACTGT CGGTGCATGT GAACATGCTC
AGCGAAACCC TGCGCAGGCC GGAGATGCCC GGAGTGCTGC TGGGGGTACT GCAGGAAGAA
GGGGCGGCGG CGGACAGATT TATCTTTGAA CTGGTGGAAA ATCTGCTGGT CAACGCGGCA
CCCGCCGTGG CCGAAGGGCT GTGGCGGCTC AGGGACGCGG GCATACGTCT GGCTCTGGAC
GGTTTCGGCT CGGGATATTC CTCGCTGGCC ATGCTGCGCA GGTATCCGCT CTCTTTGCTC
AAGGTCGACG GGTCGTTTGT CAGGGCTTCA GATGCAGACA TGGCGGCGCG CGGTATTGTG
CGGTCGGCCA GAACCCTTGC CAGCGGATTC AGCATGAAAG CCGTTGCCGA AGGCGTGGAA
CTGCCGGAGC ATGCCGAACT GCTGCGCGAA CTGGGGTATT CATCGGCGCA GGGCATGTAC
TTTGCCGCTC CCATGCGGCT GTCGCGGCTG CTGCGCATGC ATGCGGCCGG TGCGGTGTTT
CCCGTCATGG CAGGCTGA
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| Protein sequence | MTQNNNATGP QQISADTFSI LAAVYGHSPA GTGVFSHDGA LVYANGAWSG LLGSGALPAD
FFRLAPGCGA LFASVADGSR QRWSGSLPVQ LASGRQLFRA RLFALSGHAL LHGLVVAELS
GMQQENAPAA GCDVCPSWQL PVQLYAAPHA LHDRLEAVFS VLMHRLDCSC ATLWLAPQGD
EPAVLLHAPD GAGARYSSRL FGASFARHVL AQGDIVVLDK AGAMRLAESG ILPADVPLPA
AAIAAPLCSP DGRTMGVLTA CRRNSAVRFG MNDARFLRNA ANIMATVERI HQSETALRES
ETRFRAVFDH AGLGIVLLTP QGTVKSVNKG AADLASIPAA EMLGLHYSDF LCADDVTVAD
RFFHALQGGA DEVLTMTSAI RRRHAPPIWC KLTVSRVLDE GGSLRFIIVQ IEDVTDHKRE
DERLTHMAYH DVLTGLPNRA LFLDRLQSAF NRAQRNASYS FAVLYMDMDG FKDVNDSMGH
DAGDALLGMF AERVGNCLRN VDTLARLGGD EFAVLLDDVP EILQVTHVIE RITEAVSSPF
MLRGREIRCG VSIGAVLRGQ ECSGCGDLLR QADSAMYKAK RRGSNRYVIA GSSDAAAARV
MRKGEQELVT ALDSGQLELF FQPVVSLQTG RMDAVEALVR WHHPERGLLA PGAFLPLAEH
AGLQAALDAH VLRLAARAQL AMQEQEARGA AVLSVHVNML SETLRRPEMP GVLLGVLQEE
GAAADRFIFE LVENLLVNAA PAVAEGLWRL RDAGIRLALD GFGSGYSSLA MLRRYPLSLL
KVDGSFVRAS DADMAARGIV RSARTLASGF SMKAVAEGVE LPEHAELLRE LGYSSAQGMY
FAAPMRLSRL LRMHAAGAVF PVMAG
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