Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2436 |
Symbol | |
ID | 3757452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2456901 |
End bp | 2458124 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783332 |
Product | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_388928 |
Protein GI | 78357479 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0930969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATGT GCACGGCCGA AGAGGCCATT GAGGAAATCC GCAGCGGACG GATGCTCATT CTTGTAGACG ACGAAGACCG CGAAAATGAA GGCGACCTGA CCATTGCAGC CGAGCATGTT ACTCCGGAGA TCATCAATTT CATGGCCATG CACGGCCGCG GTCTCATATG CCTTGCCATG GCGCCCGAAT GGGTGGACAA GCTGCAGCTG CCGCTGATGG CCCGCCGCAA CGAATCCAAA TTCGGCACCA ACTTCACGGT ATCCATCGAA GCCCGTCAGG GCGTCACCAC CGGTATTTCC GCCAAAGACC GCGCAACGAC CATTCTTACG GCAGTGAAAG ACGACGTGAA GCCCGAAGAC ATAGTCACCC CCGGCCACAT CTTTCCCCTG CGCGCCCAGA AGGGCGGTGT CATGGTGCGT GCCGGACAGA CCGAAGGCAG TGTGGATCTG GCCCGTCTTG CCGGTCTCAA GCCCGCCGCC GTCATTTGCG AGATAATCCG CGACGACGGC GAAATGGCCC GCATGCCTGA TCTTGTGGAA TTTGCCGAAA AGCACGGCCT GAAGATTGCC ACCATACGCG ATCTTATCAG GTACCGTATG CAGCCCGGAC AACTTTCCGT ACAGCGGGTG GCAGAAGCTA AAATGCCTAC CAAATACGGT GACTTCACTG TTATCGCCTA CGAAAACGAC CACGGTGACG AAACCCACCT TGCCATGGTC AAAGGCGACA TAAAAAATCA GGACGCCGTG CTTGTGCGCG TGCACTCCGA ATGCCTCACC GGCGATGTGC TGGGATCGCT GCGCTGCGAC TGCGGCGATC AGCTGGCAGC CGCCATGTGC ACCGTGGCAG CCGAAGGCGC AGGCGTTGTG CTGTATATGC GTCAGGAAGG CCGCGGCATC GGACTGGCCA ACAAGATCAA GGCTTATGCG CTGCAGGATC AGGGCTACGA TACCGTGGAA GCCAACCACA AGCTGGGTTT CAAGGCCGAC CTGCGCGACT ACGGCATCGG CGCACAGATT CTTGTGGATC TGGGCGTGCG CAAAATGCGC ATGATGACCA ACAACCCGAA AAAAATCGTG GGCATAGAAG GCTACGGCAT TCAGGTGGTC GAACGTGTTC CCATCGAAAT GCATGCCTGC GAATTTAACG AAAATTACCT GCGCACCAAA AAGGAAAAGA TGGGGCATAT GCTGCATCTT TCCGACGAAG GGCAGGAACA GTAA
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Protein sequence | MPMCTAEEAI EEIRSGRMLI LVDDEDRENE GDLTIAAEHV TPEIINFMAM HGRGLICLAM APEWVDKLQL PLMARRNESK FGTNFTVSIE ARQGVTTGIS AKDRATTILT AVKDDVKPED IVTPGHIFPL RAQKGGVMVR AGQTEGSVDL ARLAGLKPAA VICEIIRDDG EMARMPDLVE FAEKHGLKIA TIRDLIRYRM QPGQLSVQRV AEAKMPTKYG DFTVIAYEND HGDETHLAMV KGDIKNQDAV LVRVHSECLT GDVLGSLRCD CGDQLAAAMC TVAAEGAGVV LYMRQEGRGI GLANKIKAYA LQDQGYDTVE ANHKLGFKAD LRDYGIGAQI LVDLGVRKMR MMTNNPKKIV GIEGYGIQVV ERVPIEMHAC EFNENYLRTK KEKMGHMLHL SDEGQEQ
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