| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2421 |
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| Symbol | |
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| ID | 3757437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2444432 |
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| End bp | 2445400 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637783317 |
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| Product | rhomboid family protein |
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| Protein accession | YP_388913 |
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| Protein GI | 78357464 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00797483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCGGC GCGGAGCTTC GCGCTGGTGG TGCGATGTGG TGCCTCTGCT GGCGGCTTCC
GGACTGCGTG TGCGGGCCGG AGTAGCTCCG GCATGGCCGC TGGTGCTGGC ATCGCGGGGT
ATTCCCTACC GGCTGCAGCA CCGTTCATGG GGGGCGGCGT TGTATGTGCC GCTGCTTTAT
GAGCGTCTGG CTGCCGCGGA AATACTCCGC GCCGAACATG AAAATACCCC CGCCGCAGCG
GTGCCGCTTC CCGCACCGGT TTTTCCAACT GCGGCAGTCA CTTACTGGGT GCTGCTCTGT
CTGGCCGTCT GGCACGGCGT GCGTATGCAC TGGTGGCCGT GGCTCAATCA TTTTTTACCA
GCTGTTGGCG GGCTTTCTGC GGAACAATGG GCCGAAGCCG GACGTATGGA CGGCATGCGT
GTGCTGGTGG ACCGCGAGTG GTTCCGCGTT GTGACCGCGC TTACTCTGCA CGCCGACAGC
GGCCATCTGC TGGGCAATGT TGTTTCCGGC GGTGTGTTTA TGCCTTTGCT CTGCCGTCGC
ACCGGTGCCG GTGCGGGCTG GCTGCTTGTG CTGCTGGCCG GTGCCGCCGG CAATGTCTGC
AGTGTTCTGT TTTCCGGCTA TGACTATCTG AGTATGGGGG CCTCCACAGG TGTCTTCGGC
GCTGTGGGGG CTTTGTGCGG CATAACGCTG GCTCTGGAGG GCAGGCAGGG CCGTGTGAAG
GCTTTTGCGG TCATTGCTGC AGGACTGGGG CTGCTTGCCA TGCTGGGCAT GGAGGGAGAA
CGTACCGACA TTACAGCACA TGTGGCCGGA CTTGTGTGCG GTTTTGCCGC GGGCAGGCTG
AGCGGAGGCC TGCTGCATCC CGGGGGGGCC GCCGTTGTCA GCCGCAGGTG GATGCAGACA
TGCTGCGGAC TGGCCGCAGT GCTGCTGACA GGCGCCGCCT GGGGCTGCGC TCTGGCTGTG
TATATGTAG
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| Protein sequence | MVRRGASRWW CDVVPLLAAS GLRVRAGVAP AWPLVLASRG IPYRLQHRSW GAALYVPLLY
ERLAAAEILR AEHENTPAAA VPLPAPVFPT AAVTYWVLLC LAVWHGVRMH WWPWLNHFLP
AVGGLSAEQW AEAGRMDGMR VLVDREWFRV VTALTLHADS GHLLGNVVSG GVFMPLLCRR
TGAGAGWLLV LLAGAAGNVC SVLFSGYDYL SMGASTGVFG AVGALCGITL ALEGRQGRVK
AFAVIAAGLG LLAMLGMEGE RTDITAHVAG LVCGFAAGRL SGGLLHPGGA AVVSRRWMQT
CCGLAAVLLT GAAWGCALAV YM
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