Gene Dde_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2406 
Symbol 
ID3757422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2425675 
End bp2426085 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content60% 
IMG OID637783302 
ProductSMR family multidrug efflux pump 
Protein accessionYP_388898 
Protein GI78357449 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.374447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC CACGTGCGTA TCACTGGCTG TGTCTTACCG GCGCGGTCTT TTTCGAGGTG 
GCCGGTACCA CACTGATGAA GGCTTCACAA AGCTGGAGCA TGGCTTTCGG GGCCGAGGCC
GGAGTGGTGA TCATGCTGCT GTTCATCGGT GTTTCGTATT ATCTGCTTTC ACTTTCCACC
ACGGCGCTGC CCGTGGGGGT GGCTTTTGCT TTCTGGGAAG GGGTCGGACT TGCATTCATC
ACGCTCGCCA GTGTGTTCAT TCTGGGCGAA CAGATGAGTC TGCTGCGTTT TGCTGCGCTG
TGTGCTGTGC TGGGCGGCGT GCTGCTGGTG CACCACGGCA CTTCTTCCGG CAACCGGCAA
CAGGCGGAAC CCGCCGGTGC GGTTCAGCCG CGCGGAGGGG AACAGTCATG A
 
Protein sequence
MSAPRAYHWL CLTGAVFFEV AGTTLMKASQ SWSMAFGAEA GVVIMLLFIG VSYYLLSLST 
TALPVGVAFA FWEGVGLAFI TLASVFILGE QMSLLRFAAL CAVLGGVLLV HHGTSSGNRQ
QAEPAGAVQP RGGEQS