Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2406 |
Symbol | |
ID | 3757422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2425675 |
End bp | 2426085 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783302 |
Product | SMR family multidrug efflux pump |
Protein accession | YP_388898 |
Protein GI | 78357449 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.374447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAC CACGTGCGTA TCACTGGCTG TGTCTTACCG GCGCGGTCTT TTTCGAGGTG GCCGGTACCA CACTGATGAA GGCTTCACAA AGCTGGAGCA TGGCTTTCGG GGCCGAGGCC GGAGTGGTGA TCATGCTGCT GTTCATCGGT GTTTCGTATT ATCTGCTTTC ACTTTCCACC ACGGCGCTGC CCGTGGGGGT GGCTTTTGCT TTCTGGGAAG GGGTCGGACT TGCATTCATC ACGCTCGCCA GTGTGTTCAT TCTGGGCGAA CAGATGAGTC TGCTGCGTTT TGCTGCGCTG TGTGCTGTGC TGGGCGGCGT GCTGCTGGTG CACCACGGCA CTTCTTCCGG CAACCGGCAA CAGGCGGAAC CCGCCGGTGC GGTTCAGCCG CGCGGAGGGG AACAGTCATG A
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Protein sequence | MSAPRAYHWL CLTGAVFFEV AGTTLMKASQ SWSMAFGAEA GVVIMLLFIG VSYYLLSLST TALPVGVAFA FWEGVGLAFI TLASVFILGE QMSLLRFAAL CAVLGGVLLV HHGTSSGNRQ QAEPAGAVQP RGGEQS
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