Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2405 |
Symbol | |
ID | 3757421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2425343 |
End bp | 2425678 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637783301 |
Product | SMR family multidrug efflux pump |
Protein accession | YP_388897 |
Protein GI | 78357448 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.308067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTT CGTCGATACT GACAGCAGGA CTGCTGCTGG TAATGCTGGC GGCGGCACTG GATGTGGCTG CCAACCTGCT GCTGGCAAAG TCCCGGGGAT TTACCGTGCG CCGGTACGGC GTGATGGCGC TGGCAGCTGT GGGGCTTGCT TTTGTCTGCC TGTCTTTTGC CGTGCGCAGT ATGGATCTGG CCGTTGCCTA CGCCATGTGG GGCGGTTTCG GTATTCTGGG GACCTCGCTG GGCGGCTGGG TGCTGTTCGG GCAGAAAATG GCGCCCAGTG CATGGGCCGG AATTGCCCTG CTTACCTGCG GGCTGGCCAT GCTGCACATC AGCTGA
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Protein sequence | MTFSSILTAG LLLVMLAAAL DVAANLLLAK SRGFTVRRYG VMALAAVGLA FVCLSFAVRS MDLAVAYAMW GGFGILGTSL GGWVLFGQKM APSAWAGIAL LTCGLAMLHI S
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