Gene Dde_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2405 
Symbol 
ID3757421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2425343 
End bp2425678 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content62% 
IMG OID637783301 
ProductSMR family multidrug efflux pump 
Protein accessionYP_388897 
Protein GI78357448 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.308067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTT CGTCGATACT GACAGCAGGA CTGCTGCTGG TAATGCTGGC GGCGGCACTG 
GATGTGGCTG CCAACCTGCT GCTGGCAAAG TCCCGGGGAT TTACCGTGCG CCGGTACGGC
GTGATGGCGC TGGCAGCTGT GGGGCTTGCT TTTGTCTGCC TGTCTTTTGC CGTGCGCAGT
ATGGATCTGG CCGTTGCCTA CGCCATGTGG GGCGGTTTCG GTATTCTGGG GACCTCGCTG
GGCGGCTGGG TGCTGTTCGG GCAGAAAATG GCGCCCAGTG CATGGGCCGG AATTGCCCTG
CTTACCTGCG GGCTGGCCAT GCTGCACATC AGCTGA
 
Protein sequence
MTFSSILTAG LLLVMLAAAL DVAANLLLAK SRGFTVRRYG VMALAAVGLA FVCLSFAVRS 
MDLAVAYAMW GGFGILGTSL GGWVLFGQKM APSAWAGIAL LTCGLAMLHI S