Gene Dde_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2402 
Symbol 
ID3757418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2423710 
End bp2424594 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content62% 
IMG OID637783298 
Productendonuclease IV 
Protein accessionYP_388894 
Protein GI78357445 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0690778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTA TATCACGTCA GAACAAGCCG CAACAGCAGT TGATCGGGGC GCATATGTCC 
GCGGCGGGCG GCGTGCACAA GGCCGTTGAG CGCGCAGAGG CAGCAGGAGC CACAGCGCTG
CAGGTGTTTA CACGCAACCA GCGTCAGTGG AACGCCCCGC CGCTGGAAGA GCATGACGCA
GAGCTGTTTA CGGCGGCCGT GCGCCGCTGG GGCGGATATC CGGTATCGTC ACATGCATCG
TATCTGATAA ACCCCGCTGC GGACACGCCG GAAGGGGCTG AGCGCTCGGT GGCGCTGATG
GCTGACGAAC TGCAGCGTGC GGGCAGACTG GGCATTGAAA TGGTTGTGGT GCACCCCGGA
GCGCATAAAG GACAGGGAGA AGCAGCCGGT GCCGCGCTGG CGGCGGCGCG TCTGGATGAA
GCGCTGGAAC GCTGCGGCAG TCCCGCGGTT ATGGTGCTGC TGGAAAACAC GGCGGGGCAG
GGCACCATGC TGGGGGCGTC ATTTGCCGGA CTGGCGGCTG TCATTGAAGC TTCGCGCATG
CCGGAACGCT ATGGCATATG CCTTGATACG GCGCATGCAT TCGGTGCCGG ATATGATCTG
CGAGACGCGG CATTATATGA TGCTGCCATA CGTGAACTGG ATGTCTGTGC GGGACTGGAC
AGGCTGCGGC TGGTGCATGC CAACGACTCG CTGACCGGAC TGGGCAGCCG CAGAGACAGG
CATACCCACA TAGGGCAGGG AGAACTGGGC GAAGCGGCTT TCCGCCTGCT GATGCGTGAC
GAGCGGCTGC ACCATGTGCC CAAGGTGCTT GAAACCCCCA AGGGAAAAGG GCCGGAAGAA
GACATGATGA ATATGGCTGT GCTCCGGAGG CTTGCCTGCC CCTAG
 
Protein sequence
METISRQNKP QQQLIGAHMS AAGGVHKAVE RAEAAGATAL QVFTRNQRQW NAPPLEEHDA 
ELFTAAVRRW GGYPVSSHAS YLINPAADTP EGAERSVALM ADELQRAGRL GIEMVVVHPG
AHKGQGEAAG AALAAARLDE ALERCGSPAV MVLLENTAGQ GTMLGASFAG LAAVIEASRM
PERYGICLDT AHAFGAGYDL RDAALYDAAI RELDVCAGLD RLRLVHANDS LTGLGSRRDR
HTHIGQGELG EAAFRLLMRD ERLHHVPKVL ETPKGKGPEE DMMNMAVLRR LACP