Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2402 |
Symbol | |
ID | 3757418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2423710 |
End bp | 2424594 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637783298 |
Product | endonuclease IV |
Protein accession | YP_388894 |
Protein GI | 78357445 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0690778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTA TATCACGTCA GAACAAGCCG CAACAGCAGT TGATCGGGGC GCATATGTCC GCGGCGGGCG GCGTGCACAA GGCCGTTGAG CGCGCAGAGG CAGCAGGAGC CACAGCGCTG CAGGTGTTTA CACGCAACCA GCGTCAGTGG AACGCCCCGC CGCTGGAAGA GCATGACGCA GAGCTGTTTA CGGCGGCCGT GCGCCGCTGG GGCGGATATC CGGTATCGTC ACATGCATCG TATCTGATAA ACCCCGCTGC GGACACGCCG GAAGGGGCTG AGCGCTCGGT GGCGCTGATG GCTGACGAAC TGCAGCGTGC GGGCAGACTG GGCATTGAAA TGGTTGTGGT GCACCCCGGA GCGCATAAAG GACAGGGAGA AGCAGCCGGT GCCGCGCTGG CGGCGGCGCG TCTGGATGAA GCGCTGGAAC GCTGCGGCAG TCCCGCGGTT ATGGTGCTGC TGGAAAACAC GGCGGGGCAG GGCACCATGC TGGGGGCGTC ATTTGCCGGA CTGGCGGCTG TCATTGAAGC TTCGCGCATG CCGGAACGCT ATGGCATATG CCTTGATACG GCGCATGCAT TCGGTGCCGG ATATGATCTG CGAGACGCGG CATTATATGA TGCTGCCATA CGTGAACTGG ATGTCTGTGC GGGACTGGAC AGGCTGCGGC TGGTGCATGC CAACGACTCG CTGACCGGAC TGGGCAGCCG CAGAGACAGG CATACCCACA TAGGGCAGGG AGAACTGGGC GAAGCGGCTT TCCGCCTGCT GATGCGTGAC GAGCGGCTGC ACCATGTGCC CAAGGTGCTT GAAACCCCCA AGGGAAAAGG GCCGGAAGAA GACATGATGA ATATGGCTGT GCTCCGGAGG CTTGCCTGCC CCTAG
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Protein sequence | METISRQNKP QQQLIGAHMS AAGGVHKAVE RAEAAGATAL QVFTRNQRQW NAPPLEEHDA ELFTAAVRRW GGYPVSSHAS YLINPAADTP EGAERSVALM ADELQRAGRL GIEMVVVHPG AHKGQGEAAG AALAAARLDE ALERCGSPAV MVLLENTAGQ GTMLGASFAG LAAVIEASRM PERYGICLDT AHAFGAGYDL RDAALYDAAI RELDVCAGLD RLRLVHANDS LTGLGSRRDR HTHIGQGELG EAAFRLLMRD ERLHHVPKVL ETPKGKGPEE DMMNMAVLRR LACP
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