| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2394 |
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| Symbol | |
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| ID | 3757410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2418194 |
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| End bp | 2419804 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637783290 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_388886 |
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| Protein GI | 78357437 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000698908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA AGCGTCCGAT CATTGCCGTT GTGCTCAGCC TTTTTGTTCT CATTGGCTGG
TCTTATCTTT CAGAGTTCAT GGGCTGGACA CCTGCTCCCG CCCCTGTGGA ACAAAACGCC
ACCGCCGTAC AGCAGAAGGC TTCCGAGCCT GTAGCGCAGC CGGTGCAGAC CGCTTCCGCC
CCTGCCGCAT CCTCTTTTGC CCCCACCGAA GGGCGCGAGG TAAAAGTGGA CACCCCGCTG
TACACCGCGG TGTTTCAGAG TCAGGGTGGC GTGCTTAAGC ATTTCCGGCT GAAAAAGTAT
ACCGAAAGCA TCGAAGAAGG TGCTCCGCTG GTGGAGCTTG TCACGCCGGA AGCCGCCGGA
AAGGCCCCCA TGGGGCTGCT GCTGAACGGT CAGCCCACGT GGAAGCTGGC CGCATGGCAG
TTTGAAGGCG ACGACCTGAA GCTGGACGGT TCCGGCAAAG GCGAGCTGGT CTTTGTAGGT
GAAATGGACG GTGTGCGGTT TGAAAGAACC CTCAGCTTTG ATCCGGAAAC CTACCTCATC
AGCGAAAAGG TGCGTCTGAC CGATACTGCC GGTGTTTCGC GCGACGTGCG TCTGGGCATG
ACGCTGAGCA CGACCAGCCT GAGCCCCGAG GGCGGCGCTT ACAATCTGAC CCGCATGGCG
TGGTATCAGG ACGGTTTTCA TCAGGAAACA TCTGCCGATG ATCTGCGCGA AACCGGCGTC
AAGGTTGACG AGGGCGTGAA CTGGGGCGGC GTAATGTGCA ACTATTTCAT GGCTGTCATG
GCCCCCGCCG AAGGCGCGCT GCCTTTCAAG GGCGTGCTGG AAGGCGGTGT GTACCGTTCC
GTGGTGGAAA ACAGCTCTCT TTCCATAGCG TCCGGTTCCT CTGCCGAGTT CGGCATCGGC
TACTACATTG GTCCCAAGGA AAGCGACAGA CTGGCCGCCA TGCCTTATCA TCTTGATGAG
GCTCTCAACT ACGGCTGGTT CACCTTCCTT GCTAAACCGC TGGTTTCCGG TCTGAAGTTC
TTCTACTCTT ATGCCGGCAA CTACGGTGTG GCCATCATCA TCCTGACCAT TCTGGTCAAG
CTGCTTTTCT GGCCTCTGTC GCAGAAAAGC TACAAGTCCA TGGAGCAGAT GAAAAAGCTG
CAGCCCATGG TGCAGAAAAT CAAAGAAAAA TACGGGGACG ACCGTCAGCG CATGAATCAG
GAAGTCATGG AGCTGTACAA GACCTACAAG GTCAACCCCG CGGGCGGGTG TCTGCCCATG
CTGCTTCAGA TTCCGGTTTT TCTGGGTCTG TATCAGGGCC TGCTCAACGC CATCGAGCTG
CGTCATGCGC CTTTCATCGC GCATCTGCCT TTTACCGACA TCGTGTGGCT GGCCGACCTG
TCGGCCAAGG ACCCCTTCTA CATCACCCCT GTTGTGATGG GTGCCACCAT GCTGTTGCAG
CAGCGGCTCA CTCCTGCGCC CGCCGACCCC ACACAGGCGA AGATCATGAT GTTCATGCCC
GTTGTCTTTA CTTTCATGTT CCTCAACTTC CCCGCAGGGC TTGTGGTGTA CTGGCTCGTC
AACAACGTGC TTTCCATCGG ACAGCAGTGG TGGATGCTCC GCAAGTCCTA G
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| Protein sequence | MENKRPIIAV VLSLFVLIGW SYLSEFMGWT PAPAPVEQNA TAVQQKASEP VAQPVQTASA
PAASSFAPTE GREVKVDTPL YTAVFQSQGG VLKHFRLKKY TESIEEGAPL VELVTPEAAG
KAPMGLLLNG QPTWKLAAWQ FEGDDLKLDG SGKGELVFVG EMDGVRFERT LSFDPETYLI
SEKVRLTDTA GVSRDVRLGM TLSTTSLSPE GGAYNLTRMA WYQDGFHQET SADDLRETGV
KVDEGVNWGG VMCNYFMAVM APAEGALPFK GVLEGGVYRS VVENSSLSIA SGSSAEFGIG
YYIGPKESDR LAAMPYHLDE ALNYGWFTFL AKPLVSGLKF FYSYAGNYGV AIIILTILVK
LLFWPLSQKS YKSMEQMKKL QPMVQKIKEK YGDDRQRMNQ EVMELYKTYK VNPAGGCLPM
LLQIPVFLGL YQGLLNAIEL RHAPFIAHLP FTDIVWLADL SAKDPFYITP VVMGATMLLQ
QRLTPAPADP TQAKIMMFMP VVFTFMFLNF PAGLVVYWLV NNVLSIGQQW WMLRKS
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