| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2374 |
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| Symbol | alaS |
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| ID | 3757390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2398034 |
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| End bp | 2400676 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637783270 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_388866 |
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| Protein GI | 78357417 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0815913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACTG CCAACGAAAT CAGGCACCGC TTTCTTGAAT TTTTCCGGAA GAACGGCCAC
GAGGTCGTGG ATTCTTCGTC GCTTGTGCCC AACGACGACC CCACACTGCT GTTCACCAAT
GCGGGCATGG TGCAGTTCAA AAAGATTTTT CTGGGGCAGG AAAAACGCGC ATACAGCCGC
GCGACCACAT CGCAGAAGTG TCTGCGTGTG GGCGGCAAGC ACAACGACCT TGAAAACGTG
GGCCGCACCG CGCGCCACCA CACGTTCTTT GAAATGCTGG GCAACTTTTC CTTCGGCGAC
TACTTCAAGG AAGACGCCAT ACGCTTCGCA TGGTCGTTCA TTACCGAAGA ACTGAAGCTG
CCCAAGGAAA AGCTGTACAT CACCATATAC CGGGACGACG ACGAAGCCGA AAAACTGTGG
CAGAGCGTTG CCGGTGTGCC GTCCGAACGC ATCTACCGGC TGGGCGAAAA AGACAACTTC
TGGTCCATGG GCGACACGGG TCCCTGCGGG CCCTGCTCCG AAATTCATAT TGATCAGGGT
GCCGACATGG CCTGCGGGCC GGACTGCGGC ATAGGCAAAT GCGACTGTGA CCGTTTTCTT
GAAATATGGA ACCTGGTGTT CATGCAGTAC GATCAGGCCC CTGACGGCAC CCGCACACCG
CTGCCCAACC CCTGCATCGA CACCGGCATG GGACTGGAAC GCATAGCGGC TGTCTGCCAG
AATGTGCGCT CCAACTTCGA CTGCGACCTC TTTCAGGCGT TCATCAATTA CACGGCCGAA
CTGGCAGGTG TATCCTACCG CAAAGATTCG GAAGACACCG ACACGGCTCT GCGCGTCATC
GCCGACCACA GCCGCGCCAT CGCCTTTATG ATTGCCGACG GCATTCTGCC GTCCAACGAG
GGCCGCGGCT ATGTGCTGCG CCGTCTTATC CGGCGTGCCT ACCGTTTCGG AAGACTTATC
GGGCTGGAAG GTTCGTATCT GTACAAAACG GCGCTCAAGG TTGTGGAGGA AATGGGCGGA
GCCTTTCCCG AACTGCTTGA AAACAAAGAC TTCATGGCCC GCGTGGTGCG TGAAGAAGAA
GAGCGCTTCA ACAAAACGCT GGATAAAGGC CTGCTGCTGC TTGAGGACGA ACTGTCTGCA
CTGACTGCCC GCAACAGCAC CTGCGTTGCC GGCGATGTGG CGTTCAAGCT GTACGACACC
TTCGGTTTCC CGCTTGATAT CGTTAATGAT ATCGCTGAAA AACGCGGTTT CTCCGTTGAC
GAGGACGGCT TTAAGAAACT GATGCAGGAG CAAAAAAGCC GGGCCAAGGC CGCATGGAAA
GGCGGCGGCG AGCAGACTCT GGCAGCCCGT TTTCAGGCCC TGCTGGAAGA AGGCATCGCA
TCGGAATTTG TGGGCTATGA CCATCTGTCA GCCGAAAGCC GCATCATCGC GCTGCTCGGC
GAAGACATGG AGTCCGTCGA AGCCCTGCCT GCAGGTGCCG CAGGCTATCT GGTATCCACC
CGCACACCCT TCTACGGAGA ATCGGGCGGC CAGCTGGGTG ATACCGGCGA CGCAGTTTCC
GAAACCGGAT CGGCTGAAGT GACTGACACT CTGAAGCCCT CTGCCAAACT GCTGGTGCAC
GTGGTCAAAG TATCTCAGGG CGAACTGCTG CGCGATCAGG CCGTTACCCT TACCGTACGC
GAAGGGCAGC GCTTTGCCTC TGCGCGCAAC CACACCTGCA CCCACATCCT GCACGCCGCC
CTGCGCAAGG TGCTGGGCGA CCACGTCAAA CAGGCCGGTT CGCTGGTCGG CCCGGAAAGA
CTGCGTTTCG ACTTTACGCA TATCAGTGCC ATGACGCCTG AAGAAATTCT TGCCGTGGAA
AACGAAGTCA ACCGCGTCAT TCTGTCCGAT ATAGCTCTCA ACTCCGAACA CATGGCCTAT
GACGACGCCG TACAGAAAGG CGCCATGGCC CTCTTCGGCG AAAAATACGA ATCGGAAGTG
CGTGTGGTTT CCATTCCCGG TGAATCTGTG GAACTGTGCG GCGGAACGCA TCTGCGCGCC
ACCGGACAGG CAGGGTCTTT CTACATCACC TCCGAATCAG GAGTGGCCGC CGGTGTTCGT
CGCATCGAAG CCGTCACCGG ATGGGATGCC GTACGGCTGT TCATGCAGCA GCGCGCTGAA
CTGCACGAAG TGGCAGGTCT GGTGAAAGGA AAGCCCGGCG ACATTGCAGG ACGTGTAAAA
ACACTGCAAA AAGAAGTACG TACCCTGAAA AAGGATATGG AAAAGCTGGC TGCGCAGGCT
GCTTCGGGCA AGGGCCGCAA TCTGATGGAC AGCGTGGAGG AAGTGAACGG CGTAAAACTG
CTGGCCGCCT CGCTGCCGGG TGCCAACGTG AAAGCCCTGC GCGAAGTCAT GGACGATGTC
CGTTCAAAAC TGACCTCCGG CGTGGCATGT CTTGTGGCCG TGGATGGCGA TAAGGTGCAC
ATGCTCATTG CCGTAAGCAA AGACCTGCAC GACCGGTTCA CCGCACCGGC GCTTATCAAG
GATGTGGCAG CCAGAATAGG CGGTTCCGGC GGCGGGCGCC CCGATATGGC TCAGGCCGGC
GGCACCGACC CTCAGGGGGT TGAAGACGCA TTTGCCTGCC TCAGGCAGAT CATGGGAGCC
TGA
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| Protein sequence | MITANEIRHR FLEFFRKNGH EVVDSSSLVP NDDPTLLFTN AGMVQFKKIF LGQEKRAYSR
ATTSQKCLRV GGKHNDLENV GRTARHHTFF EMLGNFSFGD YFKEDAIRFA WSFITEELKL
PKEKLYITIY RDDDEAEKLW QSVAGVPSER IYRLGEKDNF WSMGDTGPCG PCSEIHIDQG
ADMACGPDCG IGKCDCDRFL EIWNLVFMQY DQAPDGTRTP LPNPCIDTGM GLERIAAVCQ
NVRSNFDCDL FQAFINYTAE LAGVSYRKDS EDTDTALRVI ADHSRAIAFM IADGILPSNE
GRGYVLRRLI RRAYRFGRLI GLEGSYLYKT ALKVVEEMGG AFPELLENKD FMARVVREEE
ERFNKTLDKG LLLLEDELSA LTARNSTCVA GDVAFKLYDT FGFPLDIVND IAEKRGFSVD
EDGFKKLMQE QKSRAKAAWK GGGEQTLAAR FQALLEEGIA SEFVGYDHLS AESRIIALLG
EDMESVEALP AGAAGYLVST RTPFYGESGG QLGDTGDAVS ETGSAEVTDT LKPSAKLLVH
VVKVSQGELL RDQAVTLTVR EGQRFASARN HTCTHILHAA LRKVLGDHVK QAGSLVGPER
LRFDFTHISA MTPEEILAVE NEVNRVILSD IALNSEHMAY DDAVQKGAMA LFGEKYESEV
RVVSIPGESV ELCGGTHLRA TGQAGSFYIT SESGVAAGVR RIEAVTGWDA VRLFMQQRAE
LHEVAGLVKG KPGDIAGRVK TLQKEVRTLK KDMEKLAAQA ASGKGRNLMD SVEEVNGVKL
LAASLPGANV KALREVMDDV RSKLTSGVAC LVAVDGDKVH MLIAVSKDLH DRFTAPALIK
DVAARIGGSG GGRPDMAQAG GTDPQGVEDA FACLRQIMGA
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