| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2366 |
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| Symbol | |
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| ID | 3757382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2387991 |
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| End bp | 2389430 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637783262 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_388858 |
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| Protein GI | 78357409 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.062914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC TTGCATACAT ATTTTCAATT GCCGCGGCTG CCATACTGCT GGGCGGCTGC
GCTCAGGGAA AAGAAAACAA CTCCGGCCGT TTTTCGCTCA TGCAGCGTTA TCACAGCGGA
CAGCCCCTGA TGGCAGAAGA AACCGGGCAG GACACGCGGA ACAACCATGA CAACAGCGCT
GAAGCACGTG AGCATCTGGC ACGCGGACTC CGCTTTCTGC AGCAGGAAAG AGACGAGCTG
GCTTTTGAAC AGTTCAGTCG CGCCGCGTCG CTTGACCCCG CGCTGACTCA GGCCCGTTAT
CAGCGCGGTC TGCTGCTGCA CAGCCGGGGC ATGCAGCAGG AAGCCATGCA GGAAATGGAA
GCGGTACTGG CACTGGAACC TGACCATGCA AAGGCGCATG AAGCCAGCGG AGCCATTTTT
TTCACGGCAG GACTGATGGA AGAAGCACTG GATATGTTCA CCAAAGCGGT GAGTCTGGAT
GCCGGACTGG AAAACAGTCA TGCGTTCATA GCCGCCATCA GAAACTACCG GGGAGAACAT
ACACAGGCGC TGCAAGCGCT GCAGGCAGCG CTTGCGCTCT ACCCCGCATC CGCCGCGCTG
CACAATAACG CTGGCATGAC CCTTTCCATG CTGCACCGCG ATGCCGAAGC CGTCCCCCAC
TTCCGTCAGG CCATCGGTCT TGGCGCACCC GCGGCGAAAA CATGGAACAA CATGGGACTG
GCCCTGTGCA GAATGAACCG TCTGGACGAA GCGCTCATAG CATTCCGCAA TGCAGGCACC
GAGGCTGCCG CATACAATAA CCTGGGCTAC TATCTTTTTC TGCAGAACCG CCACCGCGAG
GCAGTCGTGT ATCTGGAAAA AGCCATGGAG CTTGAACCGC GCTACTACGC CCGTGCAGCT
GAAAACCTGA AACGCGCCCG ACTGGCAGCC CGTTTTGACG CGGCCCCCGC CGCACCTGCC
GCCATACGGC AGATACCGGC GCCCCCCGTC GTACAGCCCG CAGCAACACC GCATAACCGG
ACACAATCCA CCGCGTTGCC CGTGGCTGTG CCGGCGGTTG CGGCAGATAC CGCAAACATG
CCCCCCGCAG CCGGTGCCGT TTCCGTCGCA GACTCTCCCG CCGCCTTTGT GACAAACGCC
GCACCGCAGT CTGAGGACAA GGTATGGGCC GTGCATGAAA GTTCGTGGAA AGACGCTCAC
AAGGCACAAC AACGTGCCGG CGAACTGCGC AGCATGGGTT TCGATGCCAG AGTGGCCACA
TTTGCCATCA GACAACACGG CACATGGCAC AGGGTGGTGC TGGGCAGCCA TCAGACCATG
GAAGAAGCCG ACGCCCGCTG TGCAGCGCTT GTACGGCAGG CGGCATTCGA AAACCTGCGT
TCGGTACGTG TTCCTGCAAC GCTGATACCT GCCGGCACCC CCGCCGCGCA GCAACTGTAG
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| Protein sequence | MNRLAYIFSI AAAAILLGGC AQGKENNSGR FSLMQRYHSG QPLMAEETGQ DTRNNHDNSA
EAREHLARGL RFLQQERDEL AFEQFSRAAS LDPALTQARY QRGLLLHSRG MQQEAMQEME
AVLALEPDHA KAHEASGAIF FTAGLMEEAL DMFTKAVSLD AGLENSHAFI AAIRNYRGEH
TQALQALQAA LALYPASAAL HNNAGMTLSM LHRDAEAVPH FRQAIGLGAP AAKTWNNMGL
ALCRMNRLDE ALIAFRNAGT EAAAYNNLGY YLFLQNRHRE AVVYLEKAME LEPRYYARAA
ENLKRARLAA RFDAAPAAPA AIRQIPAPPV VQPAATPHNR TQSTALPVAV PAVAADTANM
PPAAGAVSVA DSPAAFVTNA APQSEDKVWA VHESSWKDAH KAQQRAGELR SMGFDARVAT
FAIRQHGTWH RVVLGSHQTM EEADARCAAL VRQAAFENLR SVRVPATLIP AGTPAAQQL
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