Gene Dde_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2353 
Symbol 
ID3757369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2373604 
End bp2376936 
Gene Length3333 bp 
Protein Length1110 aa 
Translation table11 
GC content58% 
IMG OID637783249 
Productalpha amylase domain-containing protein 
Protein accessionYP_388845 
Protein GI78357396 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.544253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTA TGATTGAGCC GGCGGGCCTT GATCCGCAGT GGTACAGGGA TGCCATCATA 
TACGAATTGC ACATCAAATC GTTTCATGAT TCCGACGGCG ACGGCATGGG CGATATGGCG
GGGCTGATTG AAAAACTGGA CTATCTGCAG GATCTCGGGG TCACGGCGCT GTGGCTGCTG
CCCTTTTACC CCTCTCCGCT GCGTGATGAC GGCTACGATA TTGCCGACTA CATGAGCATC
AACCCCGACT ACGGCAGCAT GGCTGACTTC CGCAAGCTGC TGCGCGAGGC TCATTCCCGC
GGGTTGCGCG TCATTACAGA ACTGGTGCTC AACCACACCT CAGACCAGCA TGCCTGGTTC
CGGCGGGCGC GGCGGGCCCC TGCCGGTTCG GAAGAGCGCG ATTTTTACGT GTGGAGCGAT
ACCTCGGACA GGTACAAGGA CGCCCGCATC ATTTTCAAAG ACTTCGAGCC TTCAAACTGG
TCATGGGACC CTGTGGCACG GGCATATTAC TGGCATCGTT TCTATCATCA CCAGCCTGAT
CTCAATTATG AAAATCCGGC CGTGCACAAG GCCATGTTCC GGGTCATCGA CTTCTGGCTG
GACATGGGGG TGGACGGAGT GCGGCTGGAT GCTGTGCCCT ATCTGTACGA AGAAGAAGGC
ACAAACTGCG AAAATCTGCC GCGGACCCAT GATTTTCTTA AAGCGTTGCG CAGCCACATA
GACAGCAGAT TTCAGGGCCG CATGCTGCTG GCCGAGGCGA ACCAGTGGCC GGAAGACGCG
GCCCGTTATT TCGGCGACGG TGATTCGTGT CATATGGCAT TTCATTTTCC GCTTATGCCG
CGCATGTTTA TGGCCATTGA AATGGAAGAC CGTCATCCGG TCATTGATAT AATGGAGCAG
ACTCCGGAAC TGCCGGACGG TTGCCAGTGG GCTATTTTTC TGCGTAACCA TGACGAACTG
ACGCTGGAGA TGGTGACGGA CGAAGAGCGC GACTACATGT ACCGCATGTA TGCCCGTGAT
CCGCGTGCGC GGATAAATCT CGGCATCCGC CGCCGCCTTG CCCCGCTGCT GGGCAACGAC
CGCCGCAGAG TGGAGCTGCT TAACGTGCTG CTTTTCACCA TGCCGGGGAC ACCGGTGCTT
TATTATGGTG ACGAGATAGG CATGGGGGAC AACTACTATC TGGGCGACCG CGACGGTGTG
CGTACCCCCA TGCAATGGAG TGCGGACAGA AACGCCGGTT TTTCACGCTC CAATCCGCAG
CGTCTTTTTC TGCCGGTGGT CATCGATCCG GAATACCACT ACGAGGCTGT GAATGTGGAA
ACGCAGCAGT CCAACAAAAG TTCGCTGCTG TGGTGGATGA AGCGCATCAT CGCCATGCGC
AGAAGATATA CGGCTTTCAG CCGGGGCGGC ATTTCGTTTC TCCGGCCGGA AAACTCCCGT
GTGCTTGCCT ACATGCGCAG CTCTGGTGAA GAACATGTGC TGGTGGTGAC TAACCTGTCG
CGGCACGCAC AGGCAGCTTC GCTGGATTTA AGCGGCTGGG AAGGCTACCG GCCGGTGGAA
GTCTTCAGCA ACACGCGCTT TCCCGCTGTC AGGCAACCGG CGTATACAAT TACGCTCAAT
CCTTACGGCT ACTATATTTT CCACATGCGC AGAGAGGAGG CGGCGGAAGC GCTTACCGGA
TTATTTTCGC CGCCTATGCT CATGCCGGTG TCCGGAGCGC GTTTTCTTGA TGTGGAAGTA
CGCGAGGCGC TGCAGCGCAG AGTTCTGCCC GGCTATCTGA CACGTCGCGG ATTGCTGGGA
ACAAGCGCCG TGCAGCTGCG CGAGGCTGTC ATTCTGGAAG CGGTGCCCGT GGGCGGCAAG
GGTGCCCCCA GCTGGTTGCT GATTGTGGAA GCACGGTATC AGGAGCGCCA GCCGGAATGG
TTCGGCATGC TTGTATCGTT GCTGGCTGGT GAACCTGCCC GGCAGACGGT GCGTGAAGCG
CCTGTGCATC TCATGTGCAC TTTTGGTGAA GACGCGCCGG AAGCCGTACT TGTGGAATCC
TTTGATGCCA GCTGCCGTTG CGGCGCGTTG CTGCAGCTTG TCTCGCGCAC GCAGACAGTG
AAGGGCAGGC ACGGCGAGCT GGCAGTGGCC CCCGCCGGCG GTACCCGCGG CAGAGTGCGG
GCGGCCTGCG CCGAAGATGC TCCTGCCCTG TGGAAGCCCC ATATCCACGC CACCAGCGTT
GTCTGCGGTG AAAGTGTGCT TTTCAAGGTG TACCGCCGCA TGGACGAAGG TGTGAATCCG
GATGTGGAAC TGCTGCGCTT TCTGACCGAA GAGGCGGGGT ATCCTCATGT GCCCGCGTAT
ATGGGCGTTG TGGAGTACAG ACGGTCGCGC ACATCGTCCA TGGCTGTGGC CATGCTGCAT
GAATATGTGC AGGCGCAGGG CGACGCACAG GAAATGTGCC GCGATATGGT ACGCAGGTTC
TTTGACAGGG TGCTGGCCGC ACGGGGCGAG ATGGATATCC GTCCCCGGCT GTATGCCCGT
TCTCCCGTGG AAGCCGCAGG AAGACCTTTG CCGCAGGAAT ACCGTGAACT TATGGGCGAT
ATGGATTTTG CCGGCATGCA GCTGCTGGGC AGGCGTGTGG GCGAACTGCA CCGCGCGCTG
GCGTTCAGCT CTGAAGACTC TGCTTTTGCT CCGGAGCCGT TTTCCACCCT GTATCAACGG
TCTGTGTATC AGGGTATGCA AAGCCGGGTA AAGCAGGTCC TGACCCGTCT GGAACGTTCG
CTTGCTTTGC TGCCGGAATC GGCCAGAGAC GATGCTGCGC GGGTGCTGGA ACTGCGCGAA
GAAGCTTTGC GGCGCATGCG CGGTTTTCTT ACGCGCAAAC TTGATTGTCT GAAAATCAGG
GTGCATGGCA ACCTGCATCT GGGCAATGTG CTGCGCAGCG GCAGAGAGTA TGTGATCGTG
AACTTTGAGG GCAGGCCGGA CAAGTCTCTT TCCGAACGGA GGCTGAAGCG TTCACCCCTG
CGCGATGTGG CAGATCTGGT ACGGTCGGTG CATTACACCG TGCTCACGGT GCTGATGCAT
GAATCGGTTC TCCGGCCTGA AGACCGCGCG TTTCTTGAAC CCTGGGCCGA TTTGTGGCGC
ATAGAAGCCT CAGGAGCTTT CATGACCACA TATCTTGAAG CCGTGGGCGG CAGCAGGCTG
GTGCCCGAAA ATGAACAAGG CGTTCAGGTG CTGCTGGAAG CGTTTTTGCT GGAAAAAGCG
TTTATGGAGC TTGATGCAGA ACTGAAAGCG CCTTCCGGCA TGGTGGGACT GCCGCTGGCT
GCCATTATCA CCCTGCTGGG AGCAGAGGGC TGA
 
Protein sequence
MSIMIEPAGL DPQWYRDAII YELHIKSFHD SDGDGMGDMA GLIEKLDYLQ DLGVTALWLL 
PFYPSPLRDD GYDIADYMSI NPDYGSMADF RKLLREAHSR GLRVITELVL NHTSDQHAWF
RRARRAPAGS EERDFYVWSD TSDRYKDARI IFKDFEPSNW SWDPVARAYY WHRFYHHQPD
LNYENPAVHK AMFRVIDFWL DMGVDGVRLD AVPYLYEEEG TNCENLPRTH DFLKALRSHI
DSRFQGRMLL AEANQWPEDA ARYFGDGDSC HMAFHFPLMP RMFMAIEMED RHPVIDIMEQ
TPELPDGCQW AIFLRNHDEL TLEMVTDEER DYMYRMYARD PRARINLGIR RRLAPLLGND
RRRVELLNVL LFTMPGTPVL YYGDEIGMGD NYYLGDRDGV RTPMQWSADR NAGFSRSNPQ
RLFLPVVIDP EYHYEAVNVE TQQSNKSSLL WWMKRIIAMR RRYTAFSRGG ISFLRPENSR
VLAYMRSSGE EHVLVVTNLS RHAQAASLDL SGWEGYRPVE VFSNTRFPAV RQPAYTITLN
PYGYYIFHMR REEAAEALTG LFSPPMLMPV SGARFLDVEV REALQRRVLP GYLTRRGLLG
TSAVQLREAV ILEAVPVGGK GAPSWLLIVE ARYQERQPEW FGMLVSLLAG EPARQTVREA
PVHLMCTFGE DAPEAVLVES FDASCRCGAL LQLVSRTQTV KGRHGELAVA PAGGTRGRVR
AACAEDAPAL WKPHIHATSV VCGESVLFKV YRRMDEGVNP DVELLRFLTE EAGYPHVPAY
MGVVEYRRSR TSSMAVAMLH EYVQAQGDAQ EMCRDMVRRF FDRVLAARGE MDIRPRLYAR
SPVEAAGRPL PQEYRELMGD MDFAGMQLLG RRVGELHRAL AFSSEDSAFA PEPFSTLYQR
SVYQGMQSRV KQVLTRLERS LALLPESARD DAARVLELRE EALRRMRGFL TRKLDCLKIR
VHGNLHLGNV LRSGREYVIV NFEGRPDKSL SERRLKRSPL RDVADLVRSV HYTVLTVLMH
ESVLRPEDRA FLEPWADLWR IEASGAFMTT YLEAVGGSRL VPENEQGVQV LLEAFLLEKA
FMELDAELKA PSGMVGLPLA AIITLLGAEG