| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2343 |
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| Symbol | |
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| ID | 3757354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2362136 |
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| End bp | 2363431 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637783234 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_388835 |
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| Protein GI | 78357386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00856181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCTGA AGCATTTGCG CAGCCTGCTT TCAAAGTCGC AGGGGGCTGT GGTGCAGGAT
GACGGCGTCA TCACCACGGT TTCGGGGGTA CCCGTATGGG TGGCGCGGCA GCCTGTTTTT
ACGGCTCAGG GCGGCATATG GGGGTATGAA CTGCTTTCGC GGGTGTGTCC CGAAAATGTC
TGCAGACCGG CGGAGGATGC GTATGTGGCC ACATCGTCCG TGGTGTTCGA CGGCGTAGAG
ATGGTGGCAC CGGCACTTGC CGCCGGAGAA CGTCTGCTGA TCAACTACAG TGGCGAAATG
CTGGTGGACG GTGTGCCTGC CATGCTGCCT CCCGATATAT GCGTGGTTGA AGTGCTGGAA
GACGTGCAGC CGACGCAGGA GGTGCTGGCC GCACTGCTGC GGTTGCGGCA GGCCGGGTAC
ATGGTGGCGC TGGATGACTA TATAGGGCAG GAGGCTGCAG AAACGCTTAT GCCTCTTGCC
GATATCGTCA AGGTTGACGT GCTGGGGCGT GAGCGTGAAG CCATTGCCCG CGATGTCGCC
CGAATCAGAC CGTACGGATG CACTCTGCTG GCAGAAAAAG TGGAAGACCG GCAGATGGTT
GATCTGTGTG CGGAGTTGGG CTTTGACCTG TTTCAGGGTT TTTTTTTCAG CAGGCCGCAG
CTGGTGGCGG GAAAAAAGCT GACATCCTCG GAAACGGTCA AGACCCGGCT TCTGGCCCGT
ATGGCTTCCG GCGAATACGA TATGGCCGAA CTGGGAGACA TCATCAGGAT TGACGCCGCT
CTCAGCACAC GGCTTCTGCG CTATCTCAAT TCTGCATTTT TCGCTCTGCC TTCGCCGGTG
GTTTCCGTTT CGCAGGCTGC GGGGCTGCTC GGGCAGGAAA AGCTGCGCCG GTGGCTCTGC
GTTGCCATAC TGTCAGATAT GGAGTCTTCG CCGCTGTCGC GTCATGTGGC TGTTCAGGCC
GCGCAGCGCG GAAAATTTCT TGAGCTGGTC TGCGGTACAG GCTGCGGACG CCCCGCATCG
GAAATGTTTA TGCTCGGATT GCTCTCCATG CTTGACGGAT TGCTGTCTGT CTCCATGGAG
TCCGTCATTG CGGGCATGCC TCTGGATGAG CAGCTGACAG ACGCCCTTTT GGGGCGGCCG
GGCCCGCTGC TGCCGTGGCT GCGGTTTGCC GCGGCATACG AGAAAGGTGA CTGGCAGCAG
GCTGCGGAGC TGGCGCGCAG GCTTGGGGTA AGTGGCGAAG AGGTGAGCCG CTGTTACAGC
GAGGCCATAA GCTGGGCTGC AGTCATGTTT GCCTGA
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| Protein sequence | MLLKHLRSLL SKSQGAVVQD DGVITTVSGV PVWVARQPVF TAQGGIWGYE LLSRVCPENV
CRPAEDAYVA TSSVVFDGVE MVAPALAAGE RLLINYSGEM LVDGVPAMLP PDICVVEVLE
DVQPTQEVLA ALLRLRQAGY MVALDDYIGQ EAAETLMPLA DIVKVDVLGR EREAIARDVA
RIRPYGCTLL AEKVEDRQMV DLCAELGFDL FQGFFFSRPQ LVAGKKLTSS ETVKTRLLAR
MASGEYDMAE LGDIIRIDAA LSTRLLRYLN SAFFALPSPV VSVSQAAGLL GQEKLRRWLC
VAILSDMESS PLSRHVAVQA AQRGKFLELV CGTGCGRPAS EMFMLGLLSM LDGLLSVSME
SVIAGMPLDE QLTDALLGRP GPLLPWLRFA AAYEKGDWQQ AAELARRLGV SGEEVSRCYS
EAISWAAVMF A
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