Gene Dde_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2338 
Symbol 
ID3757349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2357184 
End bp2357822 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID637783229 
Productthymidylate kinase 
Protein accessionYP_388830 
Protein GI78357381 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATTA CTTTCGAAGG GATAGAAGGT TCAGGCAAAA GTACGGCTCT TGCCCGCCTG 
AAGGACTGGC TGCAGGAGCA CGGCCACGGT GCGACGCTGA CCCGCGAGCC GGGAGGCAGC 
CGTCTGGGTG GTATTCTGCG TTCCATTCTG CTGGATATAG GCAATGACGA TCTGACAGGG 
GAAACCGAGC TTTTTCTGTA TCTTGCCGAC AGGTCGCAGC ATGTGCATCA GGTCATCCGG 
CCGGCGCTGG CAGAAGGTGT TGCTGTGATA AGCGACAGAT ACGCCGATTC CACCGTGGTC 
TATCAGGGCT ACGGCAGAGG GCTGGACCCT GCTTTGCTGC ACCGGCTCAA CGACGTGGCC 
GTGCGCGGGC TGTGGCCTGA TTTGACGCTG CTGTTTGATC TGGAGCCGGA AATCGGTCTC 
AAGCGGGCCA CCACCCGCAA TCTGCGGGAA GGCACAGGCG CAACAGAAGG CCGTTTCGAG 
GCGGAGAGTC TGGCCTTTCA CACCAGAGTG CGCGAAGGAT ATCTGACGTG GGCGGCTCTG 
AATAAGGAAC GATTCAGAAT CATTGATGCG GCCGCTTCGC CCGATGAGGT TTTTGAACAG 
GTCCGCAGCG CCGTGGCCGA TGTGTTTACC ATCGGCTGA
 
Protein sequence
MFITFEGIEG SGKSTALARL KDWLQEHGHG ATLTREPGGS RLGGILRSIL LDIGNDDLTG 
ETELFLYLAD RSQHVHQVIR PALAEGVAVI SDRYADSTVV YQGYGRGLDP ALLHRLNDVA 
VRGLWPDLTL LFDLEPEIGL KRATTRNLRE GTGATEGRFE AESLAFHTRV REGYLTWAAL 
NKERFRIIDA AASPDEVFEQ VRSAVADVFT IG