| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2336 |
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| Symbol | |
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| ID | 3757347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2354497 |
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| End bp | 2355738 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637783227 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_388828 |
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| Protein GI | 78357379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.367246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCG GGGGCTGCCT GCTGGCGCTG GCTGCCGTGC TTGTGGCGGG GCCGTGTGCG
GCGTATGCCG CCGTTCCTGC GCACAACGCA TCTTCTTCCG CAGCCGGAAC CCCGCCGGCC
GTGGCGGACG AAGTGCAGAC ACTGGCCAGT ACCGGGCAGT GGGAAGAAGT TCTGCAAGCT
ACAGGCGGAG TGGCTCCGTC CCTCAGCCTG CCGTCGGCGG ATGTGCGCAT TGTGCGTTAC
CGTGCGGAGG CTCTGCTGGC GCTGGATCGT GCCGGTGAAG CTCTGACTCT GGCCGCGCGC
GGGCTGGCGC TGGAGCCGGA CAACGCCGTT CTGCTGGCCT TGCGCGGGGA TGCCCAGCTG
GCTCTGGGGT ATCCGCAGCG TGCGGCGGAA GATTATCATG CCGCGCTGAC GAGCGATGCC
GAGTCGTGGC GCGCCATGCA CGGCATGGCG CTGGTGGCGC GTACCGCCGG CGATACGACT
GCCGCGCTGG AGTGGTACGA CAGACTGGTG CCACTGCAGC CCGACAGGCC GCTGTTGCGT
ATGGAGCGTG CCATTCTGGA GCACGAAGCC GGTCTGGTGG CGCGTGCCCG GCGCGATATG
GAAGTGGTTG CCATGCTTGC CCCGGAAAAT CCCGATGTCT GGAACAACAG GGGCATGATG
TATCTTGCAC AGGGTGACGC GCAGAAAGCC ATGGCTGACT TTGACAAGGC TCTGCGGCTT
GATCCGGAAC ATGCGGGCGC TTTGCTCAAC AGGGGAAACC TCTGGCGTGA GCGGCTTGAT
CTGCACCGTT CGCTGCACGA TCTGGATAAC GGTGTGCGTC TGCATCCCCG CAACGTCAGA
ATGCTTGTGG CCCGCATGTA CACCCATGTG GCTCTGCAGC AGTATCCTGC TGGACTGGCT
GATCTGGAAG CGGCTTACAG TGTGAACAGT CTGGATACAT ATCTGCTGAA CGAGTTTGCG
TGGTTTCTTG CCACAGTGCC TGATGCCGCC CTGCGGGACG GCGGGCGTGC CGTGCGCTAT
GCCCGCGAAG CGCTGGACCT CAGTCCTGTG CCCGTGGCAT CATATTTTGA TACGCTGGCG
GCGGCTTATG CAGCTCAGGG CCGGTTTGAC ATGGCCGTGC CCGCACAGGA GCGCGCGCTG
CTGATGGCCA TGGACCGCGC CTATCCGGAA ACGGTGCTGG GCAAGTGGCG TCAGCGGCTT
GAGTTGTACC GGAACAAGCA ACCCTACAGC AGTGGGAAGT AA
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| Protein sequence | MRRGGCLLAL AAVLVAGPCA AYAAVPAHNA SSSAAGTPPA VADEVQTLAS TGQWEEVLQA
TGGVAPSLSL PSADVRIVRY RAEALLALDR AGEALTLAAR GLALEPDNAV LLALRGDAQL
ALGYPQRAAE DYHAALTSDA ESWRAMHGMA LVARTAGDTT AALEWYDRLV PLQPDRPLLR
MERAILEHEA GLVARARRDM EVVAMLAPEN PDVWNNRGMM YLAQGDAQKA MADFDKALRL
DPEHAGALLN RGNLWRERLD LHRSLHDLDN GVRLHPRNVR MLVARMYTHV ALQQYPAGLA
DLEAAYSVNS LDTYLLNEFA WFLATVPDAA LRDGGRAVRY AREALDLSPV PVASYFDTLA
AAYAAQGRFD MAVPAQERAL LMAMDRAYPE TVLGKWRQRL ELYRNKQPYS SGK
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