| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2331 |
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| Symbol | |
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| ID | 3757342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2349438 |
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| End bp | 2351105 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637783222 |
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| Product | putative phenylpyruvate decarboxylase |
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| Protein accession | YP_388823 |
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| Protein GI | 78357374 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | [TIGR03394] indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00138899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTGA CCGAAGCGTT GCTGCATGCT CTCAAAGAGC GTGGCGCCAA AGAAGTGTAC
GGCATTCCGG GCGACTTTGC CCTGCCGTAT TTCAAGATAA TCGAATCCAC GGGTATTCTG
CCGCTTGTCA CGCTGAGCCA CGAGCCCGCC GTGGGGTTTG CCGCCGACGC ATCCGCCCGC
TTCAGAGGCG GTCTGGGGGT GGCCGCAGTG ACATACGGAG CCGGCGCATT GAACATGGTT
AACGCCATAG CGCAGGCATA TGCGGAAAAG TCGCCTGTGG TTGTCATTTC CGGCGCGCCG
GGAACCCACG AAGGCGGACA TGGGCTGCTG CTGCACCATC AGGCGAAGCA TCTTGACTCG
CAGTACCGCA TGTACAAAGA AGTCACCTGC GATCAGGCGG TGCTGGACGA TCCGGCCACT
GCGCCTGAAA CCATAGCCCG TGTGCTGCAG AGCTGTATTG AACATTCCCG CCCTGTGTAT
CTTGAGATTC CGCGTGATCT GCCTGCGGCA CCGTGTGCGC CTGTGCCTGC TTTTGCTGCT
TCCGGCACGG ATGCGGACGC CGTGGACGCC TGCGCCCGCG ACGTGCTGCA GCGCGTGCAG
AGCGCCGCGC TGCCCATGAT GATGGTGGGG GTTGAGGTGC GGCGTTACGG CATAGAAGAC
AAAGTGGCTC TGCTGGCCGA GCGGCTGGGG GTGCCTGTGG TGACCAGCTT TATGGGACGC
GGGTTGCTAG CTTCGGCCAG CTGTCTGGAA GGAACCTATC TGGGCATGGC CGGTGACGAG
ACACTCAGCG AGGCTGTGGA ATCTTCCGAC GGGCTTCTGC TGCTGGGTGT TATCATGTCG
GATACCAATT TCGGCGTGTC CGGAAGCCAG CTGGACCGCA GGCGTGTGAT GCATGCGGAG
GACAGACAGG TGCGTGTCGG CTACCATGTG TATCATGACA TTCCGCTGGG AGCGCTGGTG
GACCGTCTGC TGGCATTGCT GGATGACGGA CAGGAAGCTG ACATGGCTCT TTCGGGCTGC
GGCGGTTCTT CTGACGACAG GGCATTGCAG GGGGCGGGAC TCGCTGTGAA TCCGCGGGGG
TTCATGGCAG ATGCCGCAGA TATCACTCCC ACGGATATAG CCGCGCTGCT TAATGATTTT
TTTGCCTCGC ACGGAGCAAT GCCCGTTGCC AGCGATATAG GCGACTGCCT GTTCACCATG
CTGAGCGTGG ATGCCATTCC CATGGTGGCA CCGGGGTATT ATGCCAGCAT GGGCTTCGGG
GTGCCGGCGG GCATGGGGCT GCAGATAACG ACAAAGGAGC GTTCGCTCAT TCTGGTGGGC
GACGGCGCTT TTCAGATGAC CGGTATGGAA CTGGGCAACT GCACGCGGCT GGGTATTGAT
CCCATCGTGC TGGTGTTTAA TAATTCGTCG TGGGAAATGC TGCATGTCTT CCAGCCCGAG
ACAGCATACA GCAATCTGGG CGAATGGGAT TTTGCCGCGG TGGCTGACGG TCTGGGCGGA
CGGGGGCACA GGGCCGCCAC CCGTGCCGAG CTTGCACGTG CGCTGACACA GGCCCATGCC
GAACGCGGAC GTTTTCAGCT GATTGACGCC CGTCTGGCTC CGCATAGTCT GTCCCCCACG
CTGGCCCGTT TTGTGGAAGG TGTGCGCAGA TTCAGTTCGG GGCAATAA
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| Protein sequence | MNLTEALLHA LKERGAKEVY GIPGDFALPY FKIIESTGIL PLVTLSHEPA VGFAADASAR
FRGGLGVAAV TYGAGALNMV NAIAQAYAEK SPVVVISGAP GTHEGGHGLL LHHQAKHLDS
QYRMYKEVTC DQAVLDDPAT APETIARVLQ SCIEHSRPVY LEIPRDLPAA PCAPVPAFAA
SGTDADAVDA CARDVLQRVQ SAALPMMMVG VEVRRYGIED KVALLAERLG VPVVTSFMGR
GLLASASCLE GTYLGMAGDE TLSEAVESSD GLLLLGVIMS DTNFGVSGSQ LDRRRVMHAE
DRQVRVGYHV YHDIPLGALV DRLLALLDDG QEADMALSGC GGSSDDRALQ GAGLAVNPRG
FMADAADITP TDIAALLNDF FASHGAMPVA SDIGDCLFTM LSVDAIPMVA PGYYASMGFG
VPAGMGLQIT TKERSLILVG DGAFQMTGME LGNCTRLGID PIVLVFNNSS WEMLHVFQPE
TAYSNLGEWD FAAVADGLGG RGHRAATRAE LARALTQAHA ERGRFQLIDA RLAPHSLSPT
LARFVEGVRR FSSGQ
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