Gene Dde_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2318 
Symbol 
ID3757329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2336442 
End bp2337008 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID637783209 
Producttranscriptional regulator 
Protein accessionYP_388810 
Protein GI78357361 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00466136 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG ATGCTTTTTC TCAGCCGTAC AGGGAAATTG CCCCGCGCCT GCTGGGACTC 
AGGGATGCTG TAGGCTTTTC TGCAGAGGAG CTTGCGCAGA AAGTGGGTGT GACGTCGCAG
GTTGTTGAGC GCTACGAAAG CGGAGAGGTT GAGATTCCTG TCAGTTATCT TACCGATGTC
GCAAGAGCCT GCGGAGTTGA TCTGACGGCG CTTGTGTCGG GCGGCGACGC TCACCTGCAC
GATTTTACGC TGGTGCGCAA AGGGGAAGGG CTGGCTGTGG AACGCCGCAA GGACTACGAC
TACCGTAATC TTGCTTCGCG TATGACAGGC CGTCGTATGG AGCCTTTTAT GGTACGGGTG
CCGCCTAAAG CCGAAAGCGA CCTTTCGTGG AATGAACACA GCGGTCAGGA ATTCATCTAT
ATGCTGGAAG GCAGGCTTGA AATATGGCTT GAGTCCAAAC GCAACGTGCT GGCACCGGGC
GATTCCATCT ATTTCGAGTC GAGGATTCCG CATGCTCTGC GTGCTCTTGA CGGCGCCGAT
GCCGTGTTTC TGGATGTGAT TAGCTAG
 
Protein sequence
MSSDAFSQPY REIAPRLLGL RDAVGFSAEE LAQKVGVTSQ VVERYESGEV EIPVSYLTDV 
ARACGVDLTA LVSGGDAHLH DFTLVRKGEG LAVERRKDYD YRNLASRMTG RRMEPFMVRV
PPKAESDLSW NEHSGQEFIY MLEGRLEIWL ESKRNVLAPG DSIYFESRIP HALRALDGAD
AVFLDVIS