| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2311 |
|---|
| Symbol | |
|---|
| ID | 3757322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2328899 |
|---|
| End bp | 2330104 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637783202 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_388803 |
|---|
| Protein GI | 78357354 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.191525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGG CAGATACCGC TTTCATTCTT GTCTGTTCGG CTCTGGTGAT GTTTATGACA
CCGGGGCTGG CGTTGTTTTA CGGGGGGCTT GTCAGATCGC GCAATGTGCT CAGCACCACC
ATGCACAGCG TGGCTTTGCT CGGCATTGCC TCACTTGTCT GGTGGGCAGT GGGGTATTCT
CTGGCGTTCG GCAGTGACCA CGGGGGCATT ATCGGCGGGC TGGAGTATCT TTTTCTGCAT
AACGTAGGCA CGGAACCGGG TCCTGTCGAT AATCTGCCGC ATCTGCTGTT CATGGTTTTT
CAGTGCATGT TTGCCGTTAT CACACCGGCG TTGATTTCGG GTGCCTATGC CGAGCGTATC
CGTTTCGGGG CGATGGTGCT GTTTTCTGTT TTATGGCTTG TGCTGGTGTA TGCGCCCATG
GCGCACTGGG TTTGGGGCGG CGGATGGATG GCCCGGCTGG GTGCGCTTGA TTTTGCCGGG
GGGGCCGTGG TGCATATGAG CTCTGCCGCT GCTGCGCTGG CGGCTGCCAA TGTGCTGGGA
CTGCGCCGCG GATACGGGCG CGAGGCATTT ATTCCGCACA ATCTGCCCAT GACAGTACTG
GGAGCAGGTA TTCTGTGGTT CGGCTGGTTC GGTTTTAACG CCGGAAGCGC GCTGGCGGCC
AACGGCGCGG CAGCCAATGC ATTTGTAACC ACACATCTTG CCGCGGCTGC GGCTCTGGTG
GGCTGGCTTG CCGTGGAAAA ACTGCATGGC GGCAGAGCAA CCACCCTTGG TGCGGCTTCG
GGAGCCGTGG CGGGACTGGT TGCCATTACT CCCGCCGCAG GGTTTGTCAC ACCGGCTTCA
GCGGTGTTCA TCGGGCTGGC CGGCGGAGTG CTGTGTTACG GCGGTGTGTT TCTCAAGCAC
AAGCTGCGTT ATGATGACGC TCTTGATGTG GTGGGGATTC ATGGTGTTGG GGGCACGTGG
GGCGCGCTGG CAACCGGAAT TTTTGCCGAT GCCGCCGTGG GCGGGGCAGA CGGTCTGCTG
CACGGCAACG CATATCAGCT CTGGGTGCAG TTTGTCTCGG TTGTGGCTAC ATGGCTGTTT
TGCTATGTTG CCAGCTGGTT GCTTTTCAAG GCTGTCGATG CGGTCATGGG ACTCAGGGTC
TCCGGTGAAG CCGAGCTTGC CGGTCTTGAT GTGAGTGAAC ACAACGAAAC CGCCTACCAG
ATGTAA
|
|---|
| Protein sequence | MNAADTAFIL VCSALVMFMT PGLALFYGGL VRSRNVLSTT MHSVALLGIA SLVWWAVGYS
LAFGSDHGGI IGGLEYLFLH NVGTEPGPVD NLPHLLFMVF QCMFAVITPA LISGAYAERI
RFGAMVLFSV LWLVLVYAPM AHWVWGGGWM ARLGALDFAG GAVVHMSSAA AALAAANVLG
LRRGYGREAF IPHNLPMTVL GAGILWFGWF GFNAGSALAA NGAAANAFVT THLAAAAALV
GWLAVEKLHG GRATTLGAAS GAVAGLVAIT PAAGFVTPAS AVFIGLAGGV LCYGGVFLKH
KLRYDDALDV VGIHGVGGTW GALATGIFAD AAVGGADGLL HGNAYQLWVQ FVSVVATWLF
CYVASWLLFK AVDAVMGLRV SGEAELAGLD VSEHNETAYQ M
|
|---|
| |