| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2308 |
|---|
| Symbol | |
|---|
| ID | 3757319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2325002 |
|---|
| End bp | 2325742 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637783199 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_388800 |
|---|
| Protein GI | 78357351 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00400127 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CTGAGCCAAT CATCAGCATT AAAAACATCT ACAAATTCTT CGGTGAACTG
ACGGCCCTCA ATGATGTATC GCTGGACGTG CAGCCGGGAG AAAAGGTTGT GGTCATCGGC
CCTTCCGGTT CGGGAAAATC AACCATGCTG CGTTCCATCA ACAAGCTGGA AACCATCGAC
AAGGGCAGCA TCCGTGTGGA CGGCATGGAC ATAAATTCGC CGGAGAACGA CATAAACGCC
ATCCGGCAGG AACTGGGAAT GGTCTTCCAG AGTTTCAACC TTTTTCCGCA CAAGACGGTG
ATGGGCAACC TGACCATGGC TCCTGTGCGG CTGAAAAAGG TACCTCTGGA AGAAGCGGAA
GCCCGTGCTC TCATGCTGCT GAAAAAAGTA GGCATCAGCG ACAAAGCCAA TGTCTTCCCT
TCCAACCTGT CGGGCGGACA GCAGCAGCGC GTTGCCATAG CGCGCGCTCT GGCCATGAAC
CCCAAAATCA TGCTGTTTGA CGAGCCCACA TCGGCACTTG ACCCCGAAAT GATCGGAGAA
GTGCTGGACG TCATGGTGGC CCTTGCCAAA GAGGGTATGA CCATGGTGGT GGTTACGCAT
GAAATGGGCT TCGCCCGGGA AGTTGCGGAC CGCGTGGTCT TTATGGATCA CGGCCAGATT
CTGGAAGAAG GCACACCGGA CAGGCTGTTT GATTCGCCGG AACATCCCCG TCTGCAGAAG
TTTCTCAAAC AGATTCTCTG A
|
|---|
| Protein sequence | MTATEPIISI KNIYKFFGEL TALNDVSLDV QPGEKVVVIG PSGSGKSTML RSINKLETID
KGSIRVDGMD INSPENDINA IRQELGMVFQ SFNLFPHKTV MGNLTMAPVR LKKVPLEEAE
ARALMLLKKV GISDKANVFP SNLSGGQQQR VAIARALAMN PKIMLFDEPT SALDPEMIGE
VLDVMVALAK EGMTMVVVTH EMGFAREVAD RVVFMDHGQI LEEGTPDRLF DSPEHPRLQK
FLKQIL
|
|---|
| |