| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2307 |
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| Symbol | |
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| ID | 3757318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2324230 |
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| End bp | 2325015 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637783198 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_388799 |
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| Protein GI | 78357350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000136717 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATC AAAAAGTCCG CATTGAAGTA ACGGACGGCA TGCTGATTCC CGACCCGAAA
GACCGCAATT TTTTCAATGC GTGGTCCATC AGCTTCATCG GCGCCATCGG CATCATCATA
TACCTGTGCG CCAGCCGTCC CGATGTTTAC TGGCGGCTGC TGCAGTATCT GCCCGACGGC
ATCGCAGTCA CGTTCAAAGT CACCATTCTG TCGATTCTCT GCTCCATACC TCTGGGGCTG
CTTACCGGAC TGGGCCGCCT GTCACGCAAC AAACTCATCA ACACCATAGC ATCCACATAT
GTCGAAGTTG TCCGCGGCAT TCCCCTGCTT GTCCAGCTTT TCTACATATA TTATGCACTC
GGACGCTTTC TGCAGGTACC CAGCATGGTT GCCGCCGTCA TTGCCATGAG TGTATGCTAC
GGCGCATACA TGGGCGAGGT TTTCCGCGCG GGCATTGATT CCATAGACAA AGGCCAGACC
GAGGCATCGC GTTCTCTGGG ATTCAACAAC GTGCAGACCA TGTTTCTTGT CATTCTGCCG
CAGGCATGGC GCACCATTCT GCCTCCTGTG GGTAACGAAT TCATTGCCAT GCTCAAGGAC
ACCTCGCTCG TCTCCATTCT GGCCGTGGCC GACGTGCTGC GGCGTGGACG CGAGTTTGCA
GCGGAGTCCT TTCTGTACTT TGAAACCTAC ACCATGGTGG CCCTTATCTA TCTTGTAATA
ACCCTGCTGC TTTCCAAAGC CGTCAGCATC ATGGAAGCGA GGCTGAATTA TTATGACCGC
GACTGA
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| Protein sequence | MADQKVRIEV TDGMLIPDPK DRNFFNAWSI SFIGAIGIII YLCASRPDVY WRLLQYLPDG
IAVTFKVTIL SILCSIPLGL LTGLGRLSRN KLINTIASTY VEVVRGIPLL VQLFYIYYAL
GRFLQVPSMV AAVIAMSVCY GAYMGEVFRA GIDSIDKGQT EASRSLGFNN VQTMFLVILP
QAWRTILPPV GNEFIAMLKD TSLVSILAVA DVLRRGREFA AESFLYFETY TMVALIYLVI
TLLLSKAVSI MEARLNYYDR D
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