Gene Dde_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2300 
Symbol 
ID3757311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2319489 
End bp2320136 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID637783191 
Producthypothetical protein 
Protein accessionYP_388792 
Protein GI78357343 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000288537 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCAA TGCGTTCCGT TTTCACCAGA AGCCTTCTGG CGTTTGTTTT CTGTACCGGG 
CTGCTTTGCA CCGCCCCGCA GGCGCAGGCG GCAGACCCCG GCGAAGAAGC GCGGGAAGCT
CTCAGACACA ACGTTGACGG TATCATAACG TTGCTGTCTT CGGCGGAGTT CAAAGACCCG
CAGACCAGGC CTCAAGTTCG CGGCGAAATT GAGGCGCTTA TCCGCCAGAG ATTTGATTAT
GAAGAATTCG CCATGCGGAC CGTCGGACCG CGCTGGCGGT CTTTCAATGA CGACCAGCGT
CACCGCTTTG CAGAAGCCTT CGCCGCACTG CTCCGGTCGT CATACATGGA TCAGCTGGAA
AGCTACAACG GCGAGAAGGT GGAATATGCG GACGAAAGGG CTTCTTCTGA CGGAAGCCGC
GTAGAGGTGC AGACATTCAT TGTACAGCCC GATAAAAAAA TTCCCGTGGC ATACCGCATG
TTGCATAAAG ACCGCTGGGT AGTATACGAT GTTCTTGTGG AAGGCATCAG TCTGGTAAAA
AACTACCGGA CACAGTTTCA GGAACTGCTG CGCAAGGAAT CTCCTGACGA ACTTATAACG
CGTATCATTG CCAAGGCCGA AGAAGTCGGC AGGGCAAACG GCAACTGA
 
Protein sequence
MLAMRSVFTR SLLAFVFCTG LLCTAPQAQA ADPGEEAREA LRHNVDGIIT LLSSAEFKDP 
QTRPQVRGEI EALIRQRFDY EEFAMRTVGP RWRSFNDDQR HRFAEAFAAL LRSSYMDQLE
SYNGEKVEYA DERASSDGSR VEVQTFIVQP DKKIPVAYRM LHKDRWVVYD VLVEGISLVK
NYRTQFQELL RKESPDELIT RIIAKAEEVG RANGN