Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2299 |
Symbol | |
ID | 3757310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2319041 |
End bp | 2319487 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637783190 |
Product | putative ABC transport system substrate-binding protein |
Protein accession | YP_388791 |
Protein GI | 78357342 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0104875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGT ACACAAAAGA AACCTCCGTC GGCATTTTTG TGCTCATCGG CCTTCTGTGC CTCGGGTACG TCACCGTCAA GCTGGGAAAA ATGGAAGTAT TTTCCAGTGA AGGATATACC GTTCAGGCCC GCTTCACTTC CGTGACCGGT CTGCGGGTAG GAGCCGACGT TGAAATTTCC GGCGTGCCTG TCGGCAAGGT CAGCGGCATC AATCTTGACC AGATGGACAA CGTGGCGGTG GTCAGTCTGA GGCTGCGCCC CGATGTTGAG TTATCGGAAG ACACCATCGC ATCCGTCAAG ACCAGCGGAC TTATCGGCGA CAAGTATGTA AAGCTGTCAC CCGGCGGTGC CATGGACCTG CTGAAAGAGG GTGACGAGAT ACTGGAAACC GAATCGGCTC TGGATATTGA AGAATTAATC AGCAAATACG TGTTCGGAAA GGTGTAA
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Protein sequence | MNKYTKETSV GIFVLIGLLC LGYVTVKLGK MEVFSSEGYT VQARFTSVTG LRVGADVEIS GVPVGKVSGI NLDQMDNVAV VSLRLRPDVE LSEDTIASVK TSGLIGDKYV KLSPGGAMDL LKEGDEILET ESALDIEELI SKYVFGKV
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