Gene Dde_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2299 
Symbol 
ID3757310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2319041 
End bp2319487 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content53% 
IMG OID637783190 
Productputative ABC transport system substrate-binding protein 
Protein accessionYP_388791 
Protein GI78357342 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0104875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT ACACAAAAGA AACCTCCGTC GGCATTTTTG TGCTCATCGG CCTTCTGTGC 
CTCGGGTACG TCACCGTCAA GCTGGGAAAA ATGGAAGTAT TTTCCAGTGA AGGATATACC
GTTCAGGCCC GCTTCACTTC CGTGACCGGT CTGCGGGTAG GAGCCGACGT TGAAATTTCC
GGCGTGCCTG TCGGCAAGGT CAGCGGCATC AATCTTGACC AGATGGACAA CGTGGCGGTG
GTCAGTCTGA GGCTGCGCCC CGATGTTGAG TTATCGGAAG ACACCATCGC ATCCGTCAAG
ACCAGCGGAC TTATCGGCGA CAAGTATGTA AAGCTGTCAC CCGGCGGTGC CATGGACCTG
CTGAAAGAGG GTGACGAGAT ACTGGAAACC GAATCGGCTC TGGATATTGA AGAATTAATC
AGCAAATACG TGTTCGGAAA GGTGTAA
 
Protein sequence
MNKYTKETSV GIFVLIGLLC LGYVTVKLGK MEVFSSEGYT VQARFTSVTG LRVGADVEIS 
GVPVGKVSGI NLDQMDNVAV VSLRLRPDVE LSEDTIASVK TSGLIGDKYV KLSPGGAMDL
LKEGDEILET ESALDIEELI SKYVFGKV