Gene Dde_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2289 
Symbol 
ID3757300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2311407 
End bp2312039 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID637783180 
Producttranslation factor SUA5 
Protein accessionYP_388781 
Protein GI78357332 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC AGACCATCCC CGTGACGGAC GTGAACGAGG CGGCAGTTCT GCTGCAGGAA 
GGTAAAGTGG TGGTGTACCC CACCGAGACG TTTTTTGCCG TGGGGTGTCT GGCCACAGAC 
GTGCGCGCCG TGGATGCGGT GTACCGCATC AAGCGCCGTC CTTCGGGCAT GCCTTTGCCG 
GTGATCATCG GCAGTGCCGG TCAGCTGGGG CTGGTTACCG CCGTGTCTTC GCCGCTTGTT 
ACACGTCTGG CAGAACTTTT CTGGCCGGGG CCGCTTTCGG TGCTGGTAAC CGCGTCAGAC 
AGAATACCTG CCATTCTGAC CGGTGAAACC GGCAGGGTAG CGGTGCGGGT TACTCCCCAT 
CCTGCGGCTG CCGCTCTGTG CACCGCATGC GGAGGCGCGC TGGTTTCAAC CAGTGCCAAC 
ATCAGCGGCA GGCAGGCAGT GACCGCTGCG TCCGGTCTTG ACCCTGAACT GGTCGGACAG 
GTGGCGGCCG TGGTTGATAT GCCGCCGGCT CCCGCAGGGG GCAAACCTTC CACTCTTGTG 
GAAGTTGCCG GCCCCGCCCA TGTGCGGATA GTGCGCCCCG GGGCTGTGAC GGAAGATGCT 
CTGCAGACGG CGGGTATCAG CGTAGTGGTC TGA
 
Protein sequence
MTQQTIPVTD VNEAAVLLQE GKVVVYPTET FFAVGCLATD VRAVDAVYRI KRRPSGMPLP 
VIIGSAGQLG LVTAVSSPLV TRLAELFWPG PLSVLVTASD RIPAILTGET GRVAVRVTPH 
PAAAALCTAC GGALVSTSAN ISGRQAVTAA SGLDPELVGQ VAAVVDMPPA PAGGKPSTLV 
EVAGPAHVRI VRPGAVTEDA LQTAGISVVV