| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2286 |
|---|
| Symbol | |
|---|
| ID | 3757297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2309083 |
|---|
| End bp | 2310546 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637783177 |
|---|
| Product | glycogen/starch synthase, ADP-glucose type |
|---|
| Protein accession | YP_388778 |
|---|
| Protein GI | 78357329 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGT TGGTCCTTTT TGCCACTTCC GAGATGTACC CTTTTTCTAA AAGCGGCGGG
CTGGGCGATG TTCTGGGTGC CCTGCCGCTG ACCCTGCACC GCATGGGGGT GCGCACCGCC
GTGGTCACGC CCTTTTACGG GCGTCTGAAG ACTGCGGAAT ACGGCATTCA CCTGACCATG
AGCGATATTC CTGTCGGGTA CCCATGGGGT CCCATTACCG CAGACGTGTA CGAAGCCGAC
TTTCACGGCA TGCCCGTCTA TTTCATAAGC CGCGGCGAAT ATTTTGACAG GCGTTTTTAT
TACAACGACT ACAAGGGCGA CTATTTTGAC AACTGCGAGC GGTTTGTTTT TTTCTGCCGC
GCCGCGGCGT CCATGTGCCG TCGTCTCGGC GAAGCTCCGG CCGTGGTGCA TGCCCATGAC
TGGCAGACGG CGCTGCTTCC TGCCTTATTG TATCACTGGC GCCGGTATGA TTCCTTCTGG
GAAGACACGC GCACTGTCAT GACCATTCAC AATCTGGCCT TTCAGGGGCG CTTTTCTTCG
CGCCTGTTCG AAAACTGCGG GCTGCCGCCG CAGGCATGGT CCATGGACGG TGTGGAATTC
TACGGCGATT TCAACCTGCT CAAGGGCGGC ATTGCCTATG CCGACAAAGT GACCACTGTC
AGTCCCAGCT ATGCGCGGGA GATTACCACA CCGGAATTCG GGTGCGGTCT GGAAGGAATT
CTGCGCAGGC GTACGCATGC CCTGCACGGA ATTCTGAACG GGGCTGACTA CGACATCTGG
AAGCCGGAGG ACGACCGTTT TTTGCCCTGT ACCTATAGCC CGGACAGACT TGCGGGCAAA
CAGCGCTGCA AACGCGCCCT GCTGGATGAA CTGGGGCTGG ACAGTTCCCT GATGGAGCGT
CCGGTACTGG GTTTCATCGG GCGCCTGAGG GACCAGAAAG GCATTGACCT GCTGATAGAC
AATATTGCGC AGTTGATGGA GCGGCAGGTG GGCGTTGTTA TTCTGGGTGA GGGCAGTCTG
GAATATGAAG CGCAGGTGCT GCACCTGATG GAAGAATACA AAGGCAGGCT GTGCGCGCGC
GTTGAATACA CAGAAGACCT GGCCCACCGC ATACAGGCCG GAGCGGATAT CTTTCTGATG
CCATCACGGT ACGAGCCGTG CGGCCTGACA CAGATATACG CATTGCGCTT CGGCACGCCG
CCGGTGGCGT CTTCGCTGGG GGGGCTGCGT GATACCATCA CGCCCTGGCC TGCTCCCGAT
GCCACCGGAT TCACTTTCGA CGATGTCAGC CCGGCGGGTT TTCTGAATGC CATCATGCAG
GCAGTCAACC TGTGGGAGAA TGATCACACC GCATGGGCGG GTATGGTCAG AAGAGCCATG
GAAGTTTCAT TCACATGGGA AAAAGCCGCA GTGCAGTATC TGGACATTTA TCAGCAGCTG
GGGTTTGTCC CCGCGGGAGA ATGA
|
|---|
| Protein sequence | MQPLVLFATS EMYPFSKSGG LGDVLGALPL TLHRMGVRTA VVTPFYGRLK TAEYGIHLTM
SDIPVGYPWG PITADVYEAD FHGMPVYFIS RGEYFDRRFY YNDYKGDYFD NCERFVFFCR
AAASMCRRLG EAPAVVHAHD WQTALLPALL YHWRRYDSFW EDTRTVMTIH NLAFQGRFSS
RLFENCGLPP QAWSMDGVEF YGDFNLLKGG IAYADKVTTV SPSYAREITT PEFGCGLEGI
LRRRTHALHG ILNGADYDIW KPEDDRFLPC TYSPDRLAGK QRCKRALLDE LGLDSSLMER
PVLGFIGRLR DQKGIDLLID NIAQLMERQV GVVILGEGSL EYEAQVLHLM EEYKGRLCAR
VEYTEDLAHR IQAGADIFLM PSRYEPCGLT QIYALRFGTP PVASSLGGLR DTITPWPAPD
ATGFTFDDVS PAGFLNAIMQ AVNLWENDHT AWAGMVRRAM EVSFTWEKAA VQYLDIYQQL
GFVPAGE
|
|---|
| |