| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2274 |
|---|
| Symbol | |
|---|
| ID | 3757285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2294518 |
|---|
| End bp | 2295294 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637783165 |
|---|
| Product | reductase, iron-sulfur binding subunit, putative |
|---|
| Protein accession | YP_388766 |
|---|
| Protein GI | 78357317 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.807444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA GAAGAAGATT CCTCAAGATT GCTGGTCTGT CGGCCCTCGG TCTTGGCGCT
GGTTCCGCGA TTGGAGTGGC AGAAGCGCTG GCTGCGCCTA AAAAGGATCC TTACAGCGCC
AATGCCCATG CGCTGCATGC CGGTCGCTGG GCCATGGTTA TCGATACCCG CAAGTTCGAG
ACTCCCGAAG ACTTCCAGAA GCTCATCACG GCCTGCCACA AGCAGCACAA TGTGCCCGAC
ATTCCCAATG ATCAGCACAT TATGTGGCTG TGGACGGACA AGTACGAGCA CACCTTCCCC
GAACAGGCTA ACAACCATCT GTCCGATGAA GTGAAGGAGC GGGACTTTCT GCTGCTGTGC
AACCACTGCG AAAACCCGCC GTGCGTCCGT GTGTGCCCCA CAAAGGCCAC TTACAAACGC
CCCGACGGCA TTGTTGCCAT GGACTACCAC CGCTGCATCG GCTGCCGGTT CTGCATGGCA
GGCTGCCCCT ACGGCGCGCG TAGCTTCAAC TACGGCAACC CCAGAGAATA CCTGAAGGAT
ATCACCAACC CCGCTTTCCC CACACGTATG CGCGGCGTTG TTGAAAAATG CAACTTCTGC
GTCGAACGTC TGGCTCAGGG GCTGATGCCC TCCTGCGTTG AAGCGTCTGA AGGTGCCATT
GTCTTTGGCG ATCTGAACGA TCCGGATTCC GAAGTGCGTC AGGTTCTGGC CGAAAACTTC
ACCATCCGCC GTAAACCATC TCTGGGCACG CAGCCCGGTG TATACTACAT CATCTAA
|
|---|
| Protein sequence | MFDRRRFLKI AGLSALGLGA GSAIGVAEAL AAPKKDPYSA NAHALHAGRW AMVIDTRKFE
TPEDFQKLIT ACHKQHNVPD IPNDQHIMWL WTDKYEHTFP EQANNHLSDE VKERDFLLLC
NHCENPPCVR VCPTKATYKR PDGIVAMDYH RCIGCRFCMA GCPYGARSFN YGNPREYLKD
ITNPAFPTRM RGVVEKCNFC VERLAQGLMP SCVEASEGAI VFGDLNDPDS EVRQVLAENF
TIRRKPSLGT QPGVYYII
|
|---|
| |