| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2263 |
|---|
| Symbol | rpsL |
|---|
| ID | 3757274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2286190 |
|---|
| End bp | 2286561 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637783154 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_388755 |
|---|
| Protein GI | 78357306 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.12469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTA TCAACCAGCT CATCAGAAAA GAGCGTAAAA AGGTTGCTAA GCGGAAGAAG
ACTCCCGCGC TTCAGGCTTG CCCGCAGCGC CGTGGGGTTT GCACCCGCGT GTATACCACA
ACGCCTAAGA AGCCGAACTC GGCTTTGCGT AAAGTCGCCC GTGTGCGCCT GACCAATGCT
ATTGAAGTGA CCGCCTACAT TCCCGGTGAA GGTCACAACC TGCAGGAGCA CTCTGTTGTT
ATGATCCGCG GCGGTCGTGT AAAAGACTTG CCCGGTGTAC GTTACCATAT TGTTCGTGGT
ACTCTGGATA CTGCCGGCGT GCAGGATCGC CGCCAGGGAC GTTCCAAGTA CGGCGCCAAG
CGTCCGAAGT AG
|
|---|
| Protein sequence | MPTINQLIRK ERKKVAKRKK TPALQACPQR RGVCTRVYTT TPKKPNSALR KVARVRLTNA
IEVTAYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHIVRG TLDTAGVQDR RQGRSKYGAK
RPK
|
|---|
| |