| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2258 |
|---|
| Symbol | rpsJ |
|---|
| ID | 3757269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2282559 |
|---|
| End bp | 2282876 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637783149 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_388750 |
|---|
| Protein GI | 78357301 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000323057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAG TTAGCAGTGA TCGTATCAGG ATTAAGCTTA AAGCTTACGA TTACCGCATC
CTGGATAAGG CTGTGGCTGA AATCGTAGAT ACGGCGCGCA ACACGGGCGC TGGTGTGGCC
GGACCGATTC CGCTGCCCAC CAACATCCAC AAGTTTACGG TAAACCGAAG CGTCCATGTG
GACAAAAAGT CCCGCGAACA GTTTGAAATG CGCATCCACA AGCGGCTCAT GGATATCCTC
GAGCCTACTC AGCAGACCGT GGACGCTTTG GGGAAACTGA GTCTCCCCGC AGGCGTGGAC
GTGGAAATCA AACTCTAG
|
|---|
| Protein sequence | MTTVSSDRIR IKLKAYDYRI LDKAVAEIVD TARNTGAGVA GPIPLPTNIH KFTVNRSVHV
DKKSREQFEM RIHKRLMDIL EPTQQTVDAL GKLSLPAGVD VEIKL
|
|---|
| |