Gene Dde_2257 details

Gene Information

• Locus tag: Dde_2257
• Symbol: rplC
• ID: 3757268
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2281917
• End bp: 2282546
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637783148
• Product: 50S ribosomal protein L3
• Protein accession: YP_388749
• Protein GI: 78357300
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000117498
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGA AGATGGGAAT CCTGGGTCGC AAGATCGGCA TGACCCGCAT TTTCGCCAAT 
GATGGCAGTG CGGTGGCTGT GACCGTGATT CAAGCTGGTC CCTGTCCTGT AATTCAGGTC 
AAGGATGCGG CCAAGGATGG ATATAACGCC GTTCAGATCG GTTTTGAAGA GGCCAAAGAA 
AAGCACGTAA ACAAGCCCGC CCGTGGTCAC ATGGACAAGG CTGGTCGCGG TTTGTTCCGC 
GTGCTGCGCG AGATTCGTCT CGAAGCTCCT GCTGAGCAAA AAGTCGGCGA CGACTTGACC 
GTGGGTCTTT TTACCCCCGG CGAATTTGTG AAGGTGACCG GCACCAGCAT TGGTAAAGGT 
TTCGCCGGCG TGATGAAGCG CTGGAACTTC GGCGGTATGC CTGCAAGCCA CGGTCACGAG 
GCTGTGCACC GCTCGCCCGG TTCCATCGGT CACGCCACCT TCCCCGGCAA GGTTTGGAAG 
AACAAGAAGA TGGCCGGCCA TATGGGTGCC CGTCAGGTTA CTGTAAAGAG CCTGCAGATC 
ATCGAAGTCC GCGCGGAAGA CAACCTGATC CTGGTCAAAG GCCCCGTGCC CGGTCCCAAG 
AACGGCCTGG TCATGGTCCG CAAGCAGTAA 

 

Protein sequence

MAEKMGILGR KIGMTRIFAN DGSAVAVTVI QAGPCPVIQV KDAAKDGYNA VQIGFEEAKE 
KHVNKPARGH MDKAGRGLFR VLREIRLEAP AEQKVGDDLT VGLFTPGEFV KVTGTSIGKG 
FAGVMKRWNF GGMPASHGHE AVHRSPGSIG HATFPGKVWK NKKMAGHMGA RQVTVKSLQI 
IEVRAEDNLI LVKGPVPGPK NGLVMVRKQ