| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2251 |
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| Symbol | rpsC |
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| ID | 3757262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2278854 |
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| End bp | 2279495 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637783142 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_388743 |
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| Protein GI | 78357294 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000614716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC CTTCGGTTTC CGGCTGGGGT ACAACAAGAA CTGGCAGTCC
CGCTGGTTCA GCAAGAAGGA ATACGCTTCC TTCGTGTTTG AGGATCATAA CATCCGCAAG
TATGTTAAGA AGACCCTGTA CCACGCCGGC CTGTCCAAAA TTGAAATTGA ACGCGCCGGT
GGCAAGGTTC GCCTTATCCT CAGCACGGCC CGCCCCGGTA TCGTTATCGG CCGCAAGGGC
GTTGAGATTG AGAAACTTCG CGCAGATCTT CGTCGTAAGT TCAGCCGCGA ATTCTCCATC
GAGGTAAACG AAATCCGTCG CCCCGAAACT GACGCACAGC TTGTGGCAGA AAACATCGCC
ATGCAGCTCG AACGTCGCGT TGCTTTCCGT CGCGCCATGA AGCGCACGGT GAGCATGTCT
CGCAAGTTTG GTGCCGAAGG CATCAAGGTT GCCTGTGCCG GTCGTCTGGC CGGGGCTGAA
ATTGCCCGTT CGGAATGGTA CCGCGATGGC CGTGTGCCTT TGCAGACCCT CCGTGCCGAC
ATTGACTACG GTTATGCCGA AGCGCATACG ACCTACGGCA TTATCGGCGT CAAGGTATGG
ATCTTCAAGG GTGAAATCCT GGACAACGAG GTAGAACAGT AA
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| Protein sequence | MGQKVHPFGF RLGYNKNWQS RWFSKKEYAS FVFEDHNIRK YVKKTLYHAG LSKIEIERAG
GKVRLILSTA RPGIVIGRKG VEIEKLRADL RRKFSREFSI EVNEIRRPET DAQLVAENIA
MQLERRVAFR RAMKRTVSMS RKFGAEGIKV ACAGRLAGAE IARSEWYRDG RVPLQTLRAD
IDYGYAEAHT TYGIIGVKVW IFKGEILDNE VEQ
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