| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2248 |
|---|
| Symbol | rpsQ |
|---|
| ID | 3757259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2277983 |
|---|
| End bp | 2278249 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637783139 |
|---|
| Product | 30S ribosomal protein S17 |
|---|
| Protein accession | YP_388740 |
|---|
| Protein GI | 78357291 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0186] Ribosomal protein S17 |
|---|
| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000069797 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG CTATTGAAAA CAGAAACGGC AGAGCTCTCG TCGGTGTGGT TGTAAGCGAC
AAGAACGATA AGACCATTGT TGTTCGCGTC GAAACCTTGG TGAAGCATCC CCTGCTGAAG
AAGTACATTC GTCGCAGGAA GAAATTCACC GCTCACGATC CCAACAATGA ATGCAAAGTT
GGCGACAAGG TGAAGATCAT CGAGTTTCGT CCGGTTAGCC GGAACAAACG GTGGCATCTG
GTCTCCATCC TTGAAAAGGC GGTTTAG
|
|---|
| Protein sequence | MSEAIENRNG RALVGVVVSD KNDKTIVVRV ETLVKHPLLK KYIRRRKKFT AHDPNNECKV
GDKVKIIEFR PVSRNKRWHL VSILEKAV
|
|---|
| |