Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2242 |
Symbol | rplF |
ID | 3757253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2275573 |
End bp | 2276112 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637783133 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_388734 |
Protein GI | 78357285 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0343464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGAA TCGGAAAACA GCCTATCCCC GTTCCTTCCG GCGTGGAAGT GAAGCTGGGA GCAGACGTTG TAGAGGTTAA GGGCCCCAAA GGCAGCCTGA CCACGCCGGT TTCGCCCCTG CTCAAATATG AGATTCAGGA CGGCTCTGTG GTTATCACCA GAGTCGAAGA AACCAAAAAG GCATCCGCCC AGCACGGCCT TCGCCGTACC CTTCTTGCAA ACTGCATCGA AGGTGTCTCC AAGGGATTCA GCAAAGTCCT TGAAGTCAAC GGTGTCGGTT ACAAGGTCGC CGTTAAAGGC AACAACATCG AGCTTGCTCT CGGTTTCTCC CACCCGGTGG TCATTGAACT GCCCAAGGGT ATCGAAGCCG CAGCCGCAGG AAACAAGCTG ACCATCAGCG GTTTCGACAA GCAGCTCGTT GGTGAAGTTG CTGCCAACAT TCGCCGTGTA CGTCCGCCCG AACCCTACAA GGGCAAGGGT GTTAAATATG AACACGAGCA GATTCGCCGT AAGGCCGGCA AGTCCGGCGG CAAAAAGTAG
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Protein sequence | MSRIGKQPIP VPSGVEVKLG ADVVEVKGPK GSLTTPVSPL LKYEIQDGSV VITRVEETKK ASAQHGLRRT LLANCIEGVS KGFSKVLEVN GVGYKVAVKG NNIELALGFS HPVVIELPKG IEAAAAGNKL TISGFDKQLV GEVAANIRRV RPPEPYKGKG VKYEHEQIRR KAGKSGGKK
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