Gene Dde_2238 details

Gene Information

• Locus tag: Dde_2238
• Symbol: rplO
• ID: 3757249
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2274054
• End bp: 2274503
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637783129
• Product: 50S ribosomal protein L15
• Protein accession: YP_388730
• Protein GI: 78357281
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.150633
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTCC ACGAACTGTA TCCGTTCGAT GAAGAACGTA AACAGAGGAA ACGCGTGGGC 
CGTGGCTCCG GTTCCGGCTG GGGATGTACC TCCGGCAAAG GTAACAAGGG CCAGAACGCT 
CGCTCTGGTG GTGGTGTCCG CCCCGGTTTC GAAGGCGGCC AGATGCCCCT GCAGCGCAGA 
CTGCCCAAGC GCGGTTTCAA AAACTACCTT TTCAAGGCTC GTTACGAAGT GATCAATCTC 
GGTCAGCTCG TTGGCGCCTT TGAAGGCAAG ACTGAAATCA CCCTGGACGA CATCTACGCA 
CGCGGGCTTG CCCGTGCCGG CGCAGCTGTC AAGGTTCTGG GCAACGGCGA ATGCAATGTC 
GCCGTAAAAG TGGAAGCGCA CAAGTTCAGT GCTTCTGCTG TTGAAAAGAT CCAAAAAGCC 
GGTGGCGAAG CCAAGGCACT GGAAGGTTAG 

 

Protein sequence

MRLHELYPFD EERKQRKRVG RGSGSGWGCT SGKGNKGQNA RSGGGVRPGF EGGQMPLQRR 
LPKRGFKNYL FKARYEVINL GQLVGAFEGK TEITLDDIYA RGLARAGAAV KVLGNGECNV 
AVKVEAHKFS ASAVEKIQKA GGEAKALEG