| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2232 |
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| Symbol | rpsD |
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| ID | 3757243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2270173 |
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| End bp | 2270799 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637783123 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_388724 |
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| Protein GI | 78357275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0017217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTAAAT ATAATGATTC CAAGTGCCGC ATATGCCGGC GTGAAGGTGG CAAGCTTTTT
TTGAAAGGTG ATCGCTGCTA CACTGACAAG TGCGCATTCG ATCGCAGACC TTACGCTCCC
GGCCAGCATG GCCGCGCCCG CAAGAAGAAC AGCGACTACG CCGTGCAGCT GCGTGAAAAG
CAGAAAGTGC GTCGTATGTA CGGGCTGCTG GAAAAGCAGT TCCACAGCTA CTTCGTGAAA
GCGGACATGT CCAAGGGCGT TACCGGTAGC AACCTGCTCT CCATTCTGGA GCGCCGGTTG
GACAACGTGA TTTACCGTCT GGGCTTTGCC AACTCCCGTA GTCAGGCACG CCAGATGGTT
CGTCACGGCA TCTTCACCGT CAATGGCCGC AAGGCTACCA TTCCTTCCAT TCAGGTTAAG
GTTGGTGACG TGATTGAAGT GCGTGAAAAG AATCGCAAAA TGCCGGTTAT CGCTGAGGCT
CAGGAAGTAA TCGCACGTCG CGGTTGCCCG TCCTGGCTCG AAGCTGACGG CCCCAACTTC
CGTGGTGTAG TCAAGGCCCT GCCGCAGCGC GAGGACATCC AGTTCCCGAT GAGCGAACAG
CTTATCGTCG AACTTTACTC CAAATAA
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| Protein sequence | MAKYNDSKCR ICRREGGKLF LKGDRCYTDK CAFDRRPYAP GQHGRARKKN SDYAVQLREK
QKVRRMYGLL EKQFHSYFVK ADMSKGVTGS NLLSILERRL DNVIYRLGFA NSRSQARQMV
RHGIFTVNGR KATIPSIQVK VGDVIEVREK NRKMPVIAEA QEVIARRGCP SWLEADGPNF
RGVVKALPQR EDIQFPMSEQ LIVELYSK
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