Gene Dde_2230 details

Gene Information

• Locus tag: Dde_2230
• Symbol: rplQ
• ID: 3757241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2268636
• End bp: 2269124
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637783121
• Product: 50S ribosomal protein L17
• Protein accession: YP_388722
• Protein GI: 78357273
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0025919
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCATA GAAAATCCGG CAGAAAGCTG AACAGGAGTT CCTCGCATCG GTCTGCTCTG 
TTCCGCAACA TGGCCAAATC TCTTTTGACG TACGGTAAAA TCCGCACGAC CGAAGCTAAG 
GCCAAGGAAT TGCGCGGAGT TGTCGAGCCG CTGATTACCC TCGCACTGCG TAACGACCTG 
CACGCCCGTC GTCAGGCTTA CAAAGTTCTG GGTAGCCACC AGCTGGTTAA GCGGCTTTTC 
GACGAGATCG GTCCCAAGTT TGTTGGTGTT CCCGGTGGTT ACACCCGCGT ATTGAAGCTT 
GGTGCTCCCC GTCCCGGCGA CAATGCTCCT ATGGCTGTTA TCGAGCTGAC CCGTCTGGGT 
GACGCTGAGG CTGCCGCAAA GGAAGCTCCC GCCAAGGAAG TTGCTGAAGA GAAGGCTGCA 
AAGCCTGCTA AGAAGGCAGC TCCCAAGAAA GCAGAAAAAG AGGAAGCTGA AGACGCTGCT 
GAAGCGTAG 

 

Protein sequence

MRHRKSGRKL NRSSSHRSAL FRNMAKSLLT YGKIRTTEAK AKELRGVVEP LITLALRNDL 
HARRQAYKVL GSHQLVKRLF DEIGPKFVGV PGGYTRVLKL GAPRPGDNAP MAVIELTRLG 
DAEAAAKEAP AKEVAEEKAA KPAKKAAPKK AEKEEAEDAA EA