| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2219 |
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| Symbol | clpX |
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| ID | 3757229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2260437 |
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| End bp | 2261690 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637783109 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_388711 |
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| Protein GI | 78357262 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.222365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAA AAAATGACGG GTCTGCACAG GAGCCCAGAT GCTCGTTCTG CCAGAAAGGG
CCGGACAGCG TAAAGCGCCT GATTTCAGGG CCTGATGTTT ATATTTGCGA TGCATGCGTA
GAGCTGTGCA ATGAGATCAT TGCGCAGGAG CATGTGCAGG AATCAGTGGA TGCGGGCAAG
CTGCTCAGCC CTGCGGAAAT CAAGGCCAGG CTGGATGAGT ATGTCATAGG CCAGCATACG
GCCAAGAAAA TTCTGTCAGT TGCTGTGCAC AACCACTACA AGCGCGTGTT TTTTGCAGAA
ACACTTTCTG ATGAAGTGGA ACTGGAAAAA AGCAACATCC TGCTTGTAGG GTCTTCGGGC
AGCGGTAAAA CCCTGCTGGC TAAAACTCTG GCCCGTGTGC TTAACGTGCC GTTTGCCATA
GCCGACGCCA CTACTCTGAC AGAGGCCGGA TACGTGGGCG AAGATGTTGA AAACATTCTG
GTGCAGCTGC TGCAGAATGC CGATTATGAC ATCGAAGCCG CTTCCAAGGG TATCGTGTAT
ATTGATGAAA TCGACAAAAT CTCCCGCAAG GGCGACGGTC CTTCCATCAC CCGCGATGTT
TCCGGCGAAG GCGTGCAGCA GGCGCTGCTT AAAATCATCG AAGGCACCGA AGCCAATATT
CCGCCCAAGG GGGGGCGCAA GCATCCCCAG CAGGAATTCA TCCGGCTTGA TACGTCAAAT
ATCCTGTTCA TCATGGGCGG GGCATTTATC GGGCTGGACA AGATAATCGA GCAGCGGATG
CATGGCGGTG CCATGGGCTT TGGCGTCAAG GTAGCCTCGA AAAAGGAGAC CCCGCTTTCC
GACCTGCTTG GCAACGTGCA TCCCAACGAT CTGGTCAAGT TCGGGCTTAT TCCCGAATTC
ATCGGTCGTA TTCCGGTCAT TACGCATGTG AATGAACTTG CGGAAGATGA CCTTGTGCGC
ATTCTGCAGG AGCCGAAAAA TGCCCTGGTG CGCCAGTACC AGAAGTTGTT CGAGCTGGAT
CACGTGAAGC TGCGCTTTAC CAGCAATGCA CTGCGCGCGG TGGCCCGTCA GGCCATAGAA
CGCAAAACCG GCGCCCGCGG GCTGCGCAAC GTGCTTGAGT CCGTCATGCT TGAAATTATG
TTCAATCTGC CTTCCATGAC CGGCGTTAAA GAGTGTGTCA TCAACACCGC GGTGGTCGAA
GAAGGCAAGG AGCCTATTTT CCTGTACCAG ACGGAAGCCA AAACCGGAAC CTGA
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| Protein sequence | MDRKNDGSAQ EPRCSFCQKG PDSVKRLISG PDVYICDACV ELCNEIIAQE HVQESVDAGK
LLSPAEIKAR LDEYVIGQHT AKKILSVAVH NHYKRVFFAE TLSDEVELEK SNILLVGSSG
SGKTLLAKTL ARVLNVPFAI ADATTLTEAG YVGEDVENIL VQLLQNADYD IEAASKGIVY
IDEIDKISRK GDGPSITRDV SGEGVQQALL KIIEGTEANI PPKGGRKHPQ QEFIRLDTSN
ILFIMGGAFI GLDKIIEQRM HGGAMGFGVK VASKKETPLS DLLGNVHPND LVKFGLIPEF
IGRIPVITHV NELAEDDLVR ILQEPKNALV RQYQKLFELD HVKLRFTSNA LRAVARQAIE
RKTGARGLRN VLESVMLEIM FNLPSMTGVK ECVINTAVVE EGKEPIFLYQ TEAKTGT
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