| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2216 |
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| Symbol | |
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| ID | 3757226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2256015 |
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| End bp | 2257016 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783106 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_388708 |
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| Protein GI | 78357259 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.36837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACTGG CCGTATGTGC GGTCTTGCTT GGAGTGTCCG GCTTTGCTTC TGTATGTCTG
GGGCAGACGT ACAGGCTGAC ATACAGCAGC TTTTTTCCGC CCTCGCATGT GCAGTCCGTA
CTGGCGGAAG AGTGGGCGCG GGAAGTTGAA AAAAGAACAG CAGGCGCTGT CGTCATTGAT
TTTTATCCTG CCGGAACCCT GACAGGGGCA AGGCAGGCCT ACGACGGCGT GGTGCAGGGG
ATTTCTGACA TCGGGCTCTC CGCGCTGGCG TATTCCAGAG GACGTTTTCC GCTTATGGAA
GCCGTGGACC TGCCGCTGGG GTATACCAGC GGGGCGCAGG CCACACGGGT TGCAAACAGC
GTGTACAGTC ACTTTGTGCC GCGCGAACTG CAGGACGTGC ATGTGCTGTA TTTTCATGCC
CATGGTCCCG GGCTGCTGCA TACGCGGCAA AAGGCGGTGC GCTCGCTGGA AGATATGCAG
GGCTTGAAGC TGCGTGCCAC AGGAAATTCC GCCAGTGTGG TCAAAGCACT GGGCGGGACG
CCCGTGGCCA TGTCGATGCC TGAATCGTAT CAGTCCATCC AGCGCGGCGT GGTTGACGGC
GGCATGTATC CCGCCGAAAC AAACAAAGGC TGGAAAATGG CGGAAGTTGT TGATTACTGC
ACGGAGGCCG TGCCCGTGGC GTATACGACA ACGTTTTTTG TGGTGATGAA TAAAGACCGG
TGGGAATCTC TGCCCGGTGA GGTGCAGGAG ACCATCACCT GGATAAGCCG CGAGTGGGCA
CCGCGCCATG GTGCGGCGTG GGACGAGAGC GACGCAGAAG GCAGGGCGTT TTTTGCAGCG
CAGGGCAACA GCTTCATCAC GCTGGAAGAG GCCGAGATGG CACGCTGGAA ACAGGCTGTC
GAGCCGGTGG TTCAGGAGTA TGTGCGGCAG GCCGCAAAGC GTGGTGTGGA TGCAGAGGGC
GTGGTGGAGT TTATCCGCAA TGAGCTTGCA AGCGGCCGTT GA
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| Protein sequence | MLLAVCAVLL GVSGFASVCL GQTYRLTYSS FFPPSHVQSV LAEEWAREVE KRTAGAVVID
FYPAGTLTGA RQAYDGVVQG ISDIGLSALA YSRGRFPLME AVDLPLGYTS GAQATRVANS
VYSHFVPREL QDVHVLYFHA HGPGLLHTRQ KAVRSLEDMQ GLKLRATGNS ASVVKALGGT
PVAMSMPESY QSIQRGVVDG GMYPAETNKG WKMAEVVDYC TEAVPVAYTT TFFVVMNKDR
WESLPGEVQE TITWISREWA PRHGAAWDES DAEGRAFFAA QGNSFITLEE AEMARWKQAV
EPVVQEYVRQ AAKRGVDAEG VVEFIRNELA SGR
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