| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2198 |
|---|
| Symbol | |
|---|
| ID | 3757208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2238385 |
|---|
| End bp | 2239008 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637783088 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_388690 |
|---|
| Protein GI | 78357241 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.617868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACC TGTCTTTCCG CAGTGTTTTC GAGATAGCCC TGCCGCTGTT TCTGATTATG
GACCCGCTGG GCAACGCCGC AGTGTGCATC GGCATGCTGA AAGGTACAAC ACCCCGCGCC
ATGCGGGCTA TCCTGCTGCG CGAGCTGTGC ATCGCTCTCG GAATCATTTT CCTGTTCTAT
TACGTGGGCG ACGCCATGCT CGCCATGCTG GATATCCATC CGTCCACCCT GCGGCTGGCG
GGCGGCATCA TCCTCTTCAT GATATCCATC AAGATGATTT TTCCGCGGGA TGAAGGGTAT
ACCGAAAAAA CGCAGGATCC CTTCATCGTT CCCATTGCGG TACCGCTTAT TGCCGGACCA
TCGCTGCTGG CGGCTGTCAT GCTGTATGCT CACCGTGCCG AAGCGCCGTT TCCCGGTTCT
CCGGCAGTGC TGCTGGGCAT TCTCAGCGCA TGGCTGGGTA CCGCGGTTAT CATGCTGTTC
ACCCCCGAAA TGACCCGCGT GCTGGGAAAG CGCGGCATGC GCGCAGCCGA GCGGCTTATG
GGGCTTATAC TGGTGCTTCT GGCGGTGCAG ATGCTGGAAA ACGGCCTGAT GCTCTTTGTC
CAGAGCCTGC AGAGTGCGCT CTGA
|
|---|
| Protein sequence | MADLSFRSVF EIALPLFLIM DPLGNAAVCI GMLKGTTPRA MRAILLRELC IALGIIFLFY
YVGDAMLAML DIHPSTLRLA GGIILFMISI KMIFPRDEGY TEKTQDPFIV PIAVPLIAGP
SLLAAVMLYA HRAEAPFPGS PAVLLGILSA WLGTAVIMLF TPEMTRVLGK RGMRAAERLM
GLILVLLAVQ MLENGLMLFV QSLQSAL
|
|---|
| |