| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2196 |
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| Symbol | |
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| ID | 3757206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2234503 |
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| End bp | 2238000 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637783086 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_388688 |
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| Protein GI | 78357239 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAT TTGTCCATCT TCATTGTCAT ACGGAATACA GCCTGCTCGA CGGCGCCATC
CGCCTGAAAG ATCTTTGCGA AAAAGCCAAA GAATTCGACA TGTCTGCCGT GGCCATTACC
GACCACGGCA ACATGTACGG AGCCGTCTAT TTTTATCAGA TGGCCCAGAA AATGGGCCTG
AAGCCCATCA TCGGCTGCGA GGTATATGTC GCCCACGGCG ACCATACCGA CAAAACAGGC
GATATGGCCA AAAAACGCTA CCACCTTGTC CTTCTGGCAC AGAACAGAAC AGGGTATCAT
AATCTGGCAA AACTGGTCAC GCGCGGCTTT ACAGAAGGCT TTCACTACAA GCCCCGTGTC
AGCAAAGACC TGCTGAGGCA GTACAGTGAA GGCATCATAG CTCTTTCCGC CTGCCTTGCA
GGCGAAATTC CGCGGGCGCT GCTGAACGAA GGCATGGACC GCGCCATTGA ACTGGCCCGC
GAATATGCCG AAATATACCC CGACAGGTTT TATCTGGAGG TTCAGTCAAA CGGCCTGAAG
GAACAAGACG AGCTGAATGA CAAGCTGATA GAGCTTGCCG GTATAACCGG TCTGCCGCTG
GTGGCAACCA ACGACTGCCA TTATCTGGAA AAAACCGACG TTGAAGCGCA CGATACCCTG
CTGTGCATCC AGACCGGCGC CAAAGTCACC GACGAGCGCC GCATGCGCTT TGAGACTACG
GAACTGTATT ACAAGTCGCC GGACGAAATG GCAGCCGCCT TTGCCCATGT TCCGGAAGCC
ATAGAAAACA CCGTCAAAAT TGCCGGACAG ATTGATGTCA CGCTGGACCT CGGGAACTAT
TATTTCCCCA ACTACGAACT GCCGGAAGGC ATGACGCTTG AAGACGAATT CCGCAAGCTT
TCGCACGAGG GGCTGCAGAA ACGTCTGGAG ATTCTGCCCT ACCGCGACCA GATAGACGAA
CCCGCCTACT GGCAACGTCT GGAAAAAGAG CTTGATGTCA TTTGCAGCAT GGGTTTTCCC
GGTTATTTCC TCATCGTGCA GGACTTCATC AACTGGGCAA AAGACAACAA AATCCCTGTT
GGTCCGGGCC GTGGCTCCGC TGCCGGATCC ATCGTGGCAT GGGCGCTCAA GATAACAAAC
CTTGACCCCA TTCCCTACAA CCTGCTGTTT GAACGCTTTC TGAACAACGA ACGTGTGTCC
ATGCCTGATA TCGACGTGGA CTTCTGCGAA CGCAGGCGCG GCGAGGTCAT ACAGTATGTA
GGCAGAAAGT ACGGCGAAGA TTCAGTTGCC CAGATAACCA CCTTTGGAAA AATGAAGGCA
AAGGCGGTGG TGCGCGACGT TGCGCGGGCA CTGGGGCTGT CTTTTCAGGA CGGGGACAGA
ATAGCCAAGC TGATTCCCGA AGACCTGAAA ATGACGATTA AAAAAGCTCT GGACATGGAG
CCAGACCTTA AAACGCTTTA CACCAACGAC CCGCAGATAC GCAAACTGCT CGATATTTCC
ATGCGGCTTG AAGGACTTTC GCGTCATGCG TCCACCCATG CCGCCGGCGT GGTCATTTCA
GACAAGCCCA TGTTCGAGTA TCTGCCGCTG TATCGAGATA AAAAAGGCGG TATTGTCACC
CAGTTCGATA TGAAAATTGT CGAAAAAGTC GGTCTGGTCA AATTCGACTT TCTGGGTCTG
CGCACCATGA CGCTGGTACA GGATGCGCTG GACCTCATTG CCATGCAGGG CCTTACTCCG
CCCGACCTCG ACACCATGTC TCTGGAAGAC AAGGAAACAT ACGAACTTTA CTCCCGCGGT
GAAACCGACG GTGTCTTTCA GGTGGAAAGT TCCGGCATGC GCCAGTACCT GCGCATGCTG
CGCCCCTCCT GCTTTGACGA CGTCATCGCC ATGCTGGCCC TGTACCGTCC CGGTCCGCTG
GGGTCCGGCA TGGTGGATGA ATTCATCAAG CGTAAACACG GAGAAGTGGC GGTCACCTAT
CCGCTGGAAA GCCTGAAAGA CTGCCTGCGC GACACATACG GTGTCATTGT CTATCAGGAA
CAGGTCATGC AGATTGCCCA GATTGTGGCA AACTACACGC TGGGCGGCGC TGACCTGCTG
CGCCGCGCCA TGGGCAAAAA GAATGCCGAG GCCATGGCCG AAGAGCGCAT CAAGTTTACG
AAAGGCGCTA AAGAAAACAA CGTTCCCGAG GCAAAAGCGA CCGAGATATT TGACTTGATG
GAAAAGTTTG CGGAGTACGG CTTCAACAAG TCGCACTCAG CGGCATATGC GCTCATATCC
TATTACACCG CCTATCTGAA GGTGCACTAC CCTGTGGAAT TCATGGCCGC GCTGATGACG
TCGGAAATGA ACAATCAGGA AAAGGTGCTC AAATATGTGG CCTGCTGCAA GGATATGGGG
GTTGAGGTTC TGGCTCCTAA CGTGCAGATT TCGCGCCGCG AATTCAGCGT GCTGGACGGC
AAGGTGACAT ACGGACTGGG CGGCATCAAA AACGTGGGAG ACGAAGCTAT CCGCGAGATA
GTGAGAGCCC GCGAAGAAGA CGGTCCTTTT CAGTCCATGC TGGATCTGTG CATGCGTGTG
AATCTGCGCA AAGTCACCAA ACGGGTGCTT GAAAACCTGA TTAAAAGCGG TGCCTGCGAC
TGCCTGGGGT GCACCCGTCA GGGCATGGTG GCCGGACTTG ATACCGTGGT GGCCCGCGCA
CAGAAAAAAG CCAAAGAAAA AGCCTCCAAC CAGATTTCCA TGTTTTCTGT CATGGAGCAG
GAACCGCAGA CCTGCCCCGG ACTGGGTTTT GACTGCCCGG AACAAAGCAT GGAGGAATGG
GACGACGAAG AAAAACTGCG GAAGGAAAAG GAAGCTCTGG GCTTTTATCT CAGCAGCCAC
CCCTTACAAC CCTACCGGAA AGAAATTTTC CGGCTCAGGC TTACCCCGCT TGAAGACTGC
CGCGAGATGG GACCTGAACA GAGTTTCAAA TCAGCGGTGC TGGTCACTTC CATCAAGGAA
ATTCTGACCA AGAAAGGTCA CCGGATGGCT TTTTGTCAGG TGGAAGACCT TACCGCCTCC
GGTGAATGCA TCTTTTTTCC CGAAGCTTAT GCAGAATGCC GTGAGATGCT CCAATCTGAC
CAGCCGCTGC TGCTTGAAGC GAAAATCAGT GATAAAAAAG ATGACGAGCA GCCCGCAAAA
CAAGATGATG AAGAAGAAAT TCTTAAAGAG ATAAAAGTGA TAGGCGAAGC GGTCATTCCG
CTGGCAAAAG CCTGCCACGA AAGTGAAGAG CCTGTGACCA TAGAGCTGGG GCTTCATCAG
CTGCACTCGT CTGATCTGGA CAGCCTGAAA GCACTGCTGC GCAAAAACAA AGGGACCATT
CCCGTCAACG TGCAGCTGGT CATAGAAGAC AGCTGGTGCC TGCTGCAGCT GGGGCCGGAA
TACTCTATCC AGCCCGGCCC CGTGTTTGAT AACGACTTCA ATCAGTGGAA AATGAAAGGA
AAAACTACTC ATGCCTAA
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| Protein sequence | MPQFVHLHCH TEYSLLDGAI RLKDLCEKAK EFDMSAVAIT DHGNMYGAVY FYQMAQKMGL
KPIIGCEVYV AHGDHTDKTG DMAKKRYHLV LLAQNRTGYH NLAKLVTRGF TEGFHYKPRV
SKDLLRQYSE GIIALSACLA GEIPRALLNE GMDRAIELAR EYAEIYPDRF YLEVQSNGLK
EQDELNDKLI ELAGITGLPL VATNDCHYLE KTDVEAHDTL LCIQTGAKVT DERRMRFETT
ELYYKSPDEM AAAFAHVPEA IENTVKIAGQ IDVTLDLGNY YFPNYELPEG MTLEDEFRKL
SHEGLQKRLE ILPYRDQIDE PAYWQRLEKE LDVICSMGFP GYFLIVQDFI NWAKDNKIPV
GPGRGSAAGS IVAWALKITN LDPIPYNLLF ERFLNNERVS MPDIDVDFCE RRRGEVIQYV
GRKYGEDSVA QITTFGKMKA KAVVRDVARA LGLSFQDGDR IAKLIPEDLK MTIKKALDME
PDLKTLYTND PQIRKLLDIS MRLEGLSRHA STHAAGVVIS DKPMFEYLPL YRDKKGGIVT
QFDMKIVEKV GLVKFDFLGL RTMTLVQDAL DLIAMQGLTP PDLDTMSLED KETYELYSRG
ETDGVFQVES SGMRQYLRML RPSCFDDVIA MLALYRPGPL GSGMVDEFIK RKHGEVAVTY
PLESLKDCLR DTYGVIVYQE QVMQIAQIVA NYTLGGADLL RRAMGKKNAE AMAEERIKFT
KGAKENNVPE AKATEIFDLM EKFAEYGFNK SHSAAYALIS YYTAYLKVHY PVEFMAALMT
SEMNNQEKVL KYVACCKDMG VEVLAPNVQI SRREFSVLDG KVTYGLGGIK NVGDEAIREI
VRAREEDGPF QSMLDLCMRV NLRKVTKRVL ENLIKSGACD CLGCTRQGMV AGLDTVVARA
QKKAKEKASN QISMFSVMEQ EPQTCPGLGF DCPEQSMEEW DDEEKLRKEK EALGFYLSSH
PLQPYRKEIF RLRLTPLEDC REMGPEQSFK SAVLVTSIKE ILTKKGHRMA FCQVEDLTAS
GECIFFPEAY AECREMLQSD QPLLLEAKIS DKKDDEQPAK QDDEEEILKE IKVIGEAVIP
LAKACHESEE PVTIELGLHQ LHSSDLDSLK ALLRKNKGTI PVNVQLVIED SWCLLQLGPE
YSIQPGPVFD NDFNQWKMKG KTTHA
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